RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 NFXL1Q6ZNB6 911 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 OTOP1Q7RTM1 612 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 DTX1Q86Y01 620 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 APOBEC3FQ8IUX4 373 aaKnown RBP6.81□□□□□ -1.32
VPS33B-203ENST00000554264 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 ERO1AQ96HE7 468 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 JAKMIP1Q96N16 626 aaKnown RBP6.81□□□□□ -1.32
VPS33B-203ENST00000554264 MIPEPQ99797 713 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 KRTAP4-6Q9BYQ5 205 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 NAT10Q9H0A0 1025 aaKnown RBP6.81□□□□□ -1.32
VPS33B-203ENST00000554264 TNMDQ9H2S6 317 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 CLSTN2Q9H4D0 955 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 OGFRQ9NZT2 677 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 PLAGL2Q9UPG8 496 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 PCDHB14Q9Y5E9 798 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 TAF1P21675 1872 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 MED23Q9ULK4 1368 aa6.81□□□□□ -1.32
VPS33B-203ENST00000554264 UTYO14607 1347 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 SCO2A0A1W2PP80 73 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 WNT10BO00744 389 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 MYO1BO43795 1136 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 ZBTB48P10074 688 aaPredicted RBP6.8□□□□□ -1.32
VPS33B-203ENST00000554264 KCNJ4P48050 445 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 CWF19L2Q2TBE0 894 aaKnown RBP6.8□□□□□ -1.32
VPS33B-203ENST00000554264 BEND3Q5T5X7 828 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 CDH24Q86UP0 819 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
VPS33B-203ENST00000554264 MFSD2AQ8NA29 543 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 CCDC112Q8NEF3 446 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 PPP1R13LQ8WUF5 828 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 MAP4K1Q92918 833 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 ARMC5Q96C12 935 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 R3HDMLQ9H3Y0 253 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 EHMT1Q9H9B1 1298 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 IMPACTQ9P2X3 320 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 PRDM4Q9UKN5 801 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 SCAF8Q9UPN6 1271 aaKnown RBP6.8□□□□□ -1.32
VPS33B-203ENST00000554264 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 SCN9AQ15858 1988 aa6.8□□□□□ -1.32
VPS33B-203ENST00000554264 COL1A1P02452 1464 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 VPS37CA5D8V6 355 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PRR33A8MZF0 331 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PDE8AO60658 829 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 SASH1O94885 1247 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ATE1O95260 518 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PCCAP05165 728 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 GRIK1P39086 918 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 TPM4P67936 248 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PRKG1Q13976 671 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ARHGEF6Q15052 776 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 STX1AQ16623 288 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 DACT2Q5SW24 774 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 NAA16Q6N069 864 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 LETMD1Q6P1Q0 360 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 CWC27Q6UX04 472 aaKnown RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 KSR2Q6VAB6 950 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 GK5Q6ZS86 529 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PLA2G4DQ86XP0 818 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ZNF654Q8IZM8 581 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 CCDC191Q8NCU4 936 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 NKD1Q969G9 470 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 SPATA32Q96LK8 384 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ZNF396Q96N95 335 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 CDC5LQ99459 802 aaKnown RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 COA1Q9GZY4 146 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 ANGEL1Q9UNK9 670 aaKnown RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.79□□□□□ -1.32
VPS33B-203ENST00000554264 COL4A1P02462 1669 aa6.79□□□□□ -1.32
VPS33B-203ENST00000554264 CCDC66A2RUB6 948 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 SLC22A31A6NKX4 558 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 EN2P19622 333 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 RPS6KB1P23443 525 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 ZNF75DP51815 510 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 PAK2Q13177 524 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 G3BP1Q13283 466 aaKnown RBP eCLIP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 CREB3L3Q68CJ9 461 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 NBPF11Q86T75 865 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 WFDC3Q8IUB2 231 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 CCDC83Q8IWF9 413 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 DRC7Q8IY82 874 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 LINS1Q8NG48 757 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 DNAJB8Q8NHS0 232 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 WNK4Q96J92 1243 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 TRIM5Q9C035 493 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 TTC12Q9H892 705 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 IL1RAPL2Q9NP60 686 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 BSDC1Q9NW68 430 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 C9orf78Q9NZ63 289 aaPredicted RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 KLHL3Q9UH77 587 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 PPP2R3BQ9Y5P8 575 aa6.78□□□□□ -1.32
VPS33B-203ENST00000554264 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
VPS33B-203ENST00000554264 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms