RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 PER2O15055 1255 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
TUBB3-204ENST00000554116 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 SARSP49591 514 aaKnown RBP13.21□□□□□ -0.29
TUBB3-204ENST00000554116 ZXDAP98168 799 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 TCF15Q12870 199 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 WWC2Q6AWC2 1192 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 ABHD15Q6UXT9 468 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 PBXIP1Q96AQ6 731 aa13.21□□□□□ -0.29
TUBB3-204ENST00000554116 AGO4Q9HCK5 861 aaKnown RBP13.21□□□□□ -0.29
TUBB3-204ENST00000554116 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.29
TUBB3-204ENST00000554116 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 TMEM221A6NGB7 291 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 M0R296 226 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 MEIS1O00470 390 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 FSCN2O14926 492 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 SLC27A2O14975 620 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 KLRC1P26715 233 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 MCM5P33992 734 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 GNAQP50148 359 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 STAT5BP51692 787 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 FAM189BP81408 668 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 KRT76Q01546 638 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 PAK2Q13177 524 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 NECTIN1Q15223 517 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 CASC1Q6TDU7 716 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 CCDC60Q8IWA6 550 aaPredicted RBP13.2□□□□□ -0.3
TUBB3-204ENST00000554116 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 CRYGNQ8WXF5 182 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 PPP2R3CQ969Q6 453 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 TMEM87BQ96K49 555 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 S1PR5Q9H228 398 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 CWH43Q9H720 699 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
TUBB3-204ENST00000554116 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
TUBB3-204ENST00000554116 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
TUBB3-204ENST00000554116 DNAH14Q0VDD8 3507 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 GFRA3O60609 400 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
TUBB3-204ENST00000554116 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
TUBB3-204ENST00000554116 DSC3Q14574 896 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 DUSP6Q16828 381 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 NME8Q8N427 588 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
TUBB3-204ENST00000554116 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
TUBB3-204ENST00000554116 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 ST3GAL5Q9UNP4 418 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
TUBB3-204ENST00000554116 IGLV3-22A0A075B6J6 115 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 GPR32O75388 356 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 FGF18O76093 207 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 VCPP55072 806 aaKnown RBP13.18□□□□□ -0.3
TUBB3-204ENST00000554116 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
TUBB3-204ENST00000554116 CREB3L3Q68CJ9 461 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 SYCE2Q6PIF2 218 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 TMEM184AQ6ZMB5 413 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 NFXL1Q6ZNB6 911 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 ADAM2Q99965 735 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 PHF7Q9BWX1 381 aaPredicted RBP13.18□□□□□ -0.3
TUBB3-204ENST00000554116 AZI2Q9H6S1 392 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 TLE6Q9H808 572 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
TUBB3-204ENST00000554116 GVINP1Q7Z2Y8 2422 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 HIDE1A8MVS5 230 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 EDIL3O43854 480 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 CDC45O75419 566 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 RPS6KA5O75582 802 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 C22orf31O95567 290 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 CALM1P0DP23 149 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 CALM2P0DP24 149 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 CALM3P0DP25 149 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 FGFR1P11362 822 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
TUBB3-204ENST00000554116 IBSPP21815 317 aaPredicted RBP13.17□□□□□ -0.3
TUBB3-204ENST00000554116 SREBF1P36956 1147 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 UBE3AQ05086 875 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 APOA5Q6Q788 366 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
TUBB3-204ENST00000554116 COLGALT1Q8NBJ5 622 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms