RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TYW1Q9NV66 732 aaKnown RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 NAGPAQ9UK23 515 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 FOSP01100 380 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 EPHA7Q15375 998 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 GMCL1P1Q8NEA9 526 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 RUBCNQ92622 972 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 QTRT2Q9H974 415 aaKnown RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 PLCB1Q9NQ66 1216 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 FEZ2Q9UHY8 353 aaPredicted RBP15.94■□□□□ 0.14
ACTN1-211ENST00000553882 PRR12Q9ULL5 1215 aa15.94■□□□□ 0.14
ACTN1-211ENST00000553882 HSF2BPO75031 334 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
ACTN1-211ENST00000553882 RINT1Q6NUQ1 792 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 KRT27Q7Z3Y8 459 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 MYCT1Q8N699 235 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 CCDC43Q96MW1 224 aaKnown RBP15.93■□□□□ 0.14
ACTN1-211ENST00000553882 ZIM3Q96PE6 472 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 WDR18Q9BV38 432 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 COG2Q14746 738 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 RPS6KA1Q15418 735 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 AOC3Q16853 763 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 GLE1Q53GS7 698 aaKnown RBP15.93■□□□□ 0.14
ACTN1-211ENST00000553882 TTMPQ5BVD1 217 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 CCDC174Q6PII3 467 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 GBP6Q6ZN66 633 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 TAF4BQ92750 862 aa15.93■□□□□ 0.14
ACTN1-211ENST00000553882 TGFB1I1O43294 461 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 RAD51CO43502 376 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 SLC26A4O43511 780 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 GFPT2O94808 682 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 KIAA1755Q5JYT7 1200 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 CAVIN3Q969G5 261 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 DYDC2Q96IM9 177 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 PRMT6Q96LA8 375 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 SIX2Q9NPC8 291 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 GDF3Q9NR23 364 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 COL11A2P13942 1736 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 IGLV3-22A0A075B6J6 115 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 CEP104O60308 925 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 FAM13AO94988 1023 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 EYA4O95677 639 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 CIITAP33076 1130 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 ZYXQ15942 572 aaKnown RBP15.92■□□□□ 0.14
ACTN1-211ENST00000553882 LRCH2Q5VUJ6 765 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 USP38Q8NB14 1042 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 CASKIN2Q8WXE0 1202 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 SH3GL2Q99962 352 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 AP1M1Q9BXS5 423 aa15.92■□□□□ 0.14
ACTN1-211ENST00000553882 TMCO5BA8MYB1 307 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 FLOT1O75955 427 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 ACER1Q8TDN7 264 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 ATAD5Q96QE3 1844 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 OPA1O60313 960 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 SLITRK3O94933 977 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 KIF4AO95239 1232 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 TNFRSF8P28908 595 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 STAT2P52630 851 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 PPFIA1Q13136 1202 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 PAK2Q13177 524 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 HSD17B14Q9BPX1 270 aa15.91■□□□□ 0.14
ACTN1-211ENST00000553882 POLR3CQ9BUI4 534 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-211ENST00000553882 BZW2Q9Y6E2 419 aaKnown RBP15.91■□□□□ 0.14
ACTN1-211ENST00000553882 ZMYM2Q9UBW7 1377 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 TCP10L2B9ZVM9 353 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 PPFIA4O75335 1185 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 IRAK1P51617 712 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 BMT2Q1RMZ1 405 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 OTOP1Q7RTM1 612 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 FAM186BQ8IYM0 893 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 U2AF1L4Q8WU68 220 aaKnown RBP15.9■□□□□ 0.14
ACTN1-211ENST00000553882 CAPS2Q9BXY5 557 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 METTL14Q9HCE5 456 aaKnown RBP15.9■□□□□ 0.14
ACTN1-211ENST00000553882 SERPINA10Q9UK55 444 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 GOLGA8KD6RF30 607 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 SHOX2O60902 331 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-211ENST00000553882 CHRNA5P30532 468 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 MMP14P50281 582 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 CYP2J2P51589 502 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 HLTFQ14527 1009 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACTN1-211ENST00000553882 ALS2CLQ60I27 953 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 MCTP2Q6DN12 878 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 LRRC57Q8N9N7 239 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 OLFML3Q9NRN5 406 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 WRAP73Q9P2S5 460 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-211ENST00000553882 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
ACTN1-211ENST00000553882 CLRN2A0PK11 232 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.13
ACTN1-211ENST00000553882 TRIM49P0CI25 452 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 TRIM49CP0CI26 452 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 ATP1A2P50993 1020 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 JAM2P57087 298 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 GNGT1P63211 74 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 PLS1Q14651 629 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms