RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 APBB2Q92870 758 aa11.5□□□□□ -0.57
HNRNPC-208ENST00000553753 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
HNRNPC-208ENST00000553753 WDR81Q562E7 1941 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 TRANK1O15050 2925 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 TLL1O43897 1013 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 GJB5O95377 273 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 OATP04181 439 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 CA3P07451 260 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 PRKCEQ02156 737 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 LPIN1Q14693 890 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 UGCGQ16739 394 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 FBXO47Q5MNV8 452 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 PPP2R2DQ66LE6 453 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■□ 21.4
HNRNPC-208ENST00000553753 TMCO2Q7Z6W1 182 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 KIAA0319LQ8IZA0 1049 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 USP38Q8NB14 1042 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 EVPLQ92817 2033 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 EML1O00423 815 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 MAGEB2O15479 319 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 BAG4O95429 457 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 C22orf31O95567 290 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 AMHP03971 560 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 MCM2P49736 904 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 MYLIPQ8WY64 445 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 TMX3Q96JJ7 454 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 CELF4Q9BZC1 486 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 FOXP1Q9H334 677 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 TRPV2Q9Y5S1 764 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 SQORQ9Y6N5 450 aa11.49□□□□□ -0.57
HNRNPC-208ENST00000553753 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 MICAL3Q7RTP6 2002 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 RAD9AQ99638 391 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 PCDHA12Q9UN75 941 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 GINS2Q9Y248 185 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 PTPRSQ13332 1948 aa11.48□□□□□ -0.57
HNRNPC-208ENST00000553753 SIP14410 1827 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 WNT7AO00755 349 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 NEMFO60524 1076 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 FOSL2P15408 326 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 TMOD1P28289 359 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 PSMC5P62195 406 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 CALCRLQ16602 461 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 EFCAB12Q6NXP0 572 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 FAM117BQ6P1L5 589 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 TOP1MTQ969P6 601 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 NIFKQ9BYG3 293 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 PRDM12Q9H4Q4 367 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 INSL6Q9Y581 213 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 GTF3C3Q9Y5Q9 886 aa11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 SPTBN5Q9NRC6 3674 aaKnown RBP11.47□□□□□ -0.57
HNRNPC-208ENST00000553753 DKC1O60832 514 aaKnown RBP eCLIP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 STBD1O95210 358 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 P4HBP07237 508 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 ATP2B1P20020 1258 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 CD52P31358 61 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 TAP1Q03518 808 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 SPIRE1Q08AE8 756 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 TBC1D8BQ0IIM8 1120 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 EPHA7Q15375 998 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 TARBP2Q15633 366 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 TTC12Q9H892 705 aaPredicted RBP11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 SUGCTQ9HAC7 445 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 PADI3Q9ULW8 664 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 KIF3AQ9Y496 699 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 REV3LO60673 3130 aa11.46□□□□□ -0.57
HNRNPC-208ENST00000553753 LCHNA4D1U4 455 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 ENPP3O14638 875 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 UPP2O95045 317 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 VTNP04004 478 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 MCM7P33993 719 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 TXKP42681 527 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 CLCN3P51790 818 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 PAK2Q13177 524 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 KIZQ2M2Z5 673 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 MTERF2Q49AM1 385 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 NCAPH2Q6IBW4 605 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 ANO5Q75V66 913 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 NOSTRINQ8IVI9 506 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
HNRNPC-208ENST00000553753 LINC01465Q8N7H1 131 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms