RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 NEK9Q8TD19 979 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
TMEM253-202ENST00000553744 FAM49AQ9H0Q0 323 aaPredicted RBP13.32□□□□□ -0.28
TMEM253-202ENST00000553744 MTMR6Q9Y217 621 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 KAT6AQ92794 2004 aa13.32□□□□□ -0.28
TMEM253-202ENST00000553744 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 TMEM150BA6NC51 233 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 MAGEB2O15479 319 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 STX6O43752 255 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 SLITRK3O94933 977 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 PRPHP41219 470 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 TECP42680 631 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 ATP2C1P98194 919 aaPredicted RBP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 RESTQ13127 1097 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 TMEM266Q2M3C6 531 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 OTOP2Q7RTS6 562 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 LINC01465Q8N7H1 131 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 HSD17B14Q9BPX1 270 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 MTIF3Q9H2K0 278 aaKnown RBP13.31□□□□□ -0.28
TMEM253-202ENST00000553744 ZSWIM4Q9H7M6 989 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
TMEM253-202ENST00000553744 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 LYPLA2O95372 231 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 CHRNA1P02708 482 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 ACTN1P12814 892 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 YWHABP31946 246 aaKnown RBP13.3□□□□□ -0.28
TMEM253-202ENST00000553744 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 MTERF2Q49AM1 385 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 PLA2G4FQ68DD2 849 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 CNKSR3Q6P9H4 555 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 TPH2Q8IWU9 490 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 KIAA0319LQ8IZA0 1049 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 NME8Q8N427 588 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 TRPV2Q9Y5S1 764 aa13.3□□□□□ -0.28
TMEM253-202ENST00000553744 SIP14410 1827 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 M0QZ92 97 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 BAIAP3O94812 1187 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 BMP15O95972 392 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 SPATA31C1P0DKV0 1188 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 TMOD1P28289 359 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 CLCN3P51790 818 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 TMEM62Q0P6H9 643 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 IER5Q5VY09 327 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 HAUS3Q68CZ6 603 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 EFCAB12Q6NXP0 572 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 LRRC71Q8N4P6 559 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 ERMNQ8TAM6 284 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 SH2D3AQ9BRG2 576 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
TMEM253-202ENST00000553744 OSBPL7Q9BZF2 842 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 RAB34Q9BZG1 259 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
TMEM253-202ENST00000553744 TUFT1Q9NNX1 390 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 CXXC1Q9P0U4 656 aaPredicted RBP13.29□□□□□ -0.28
TMEM253-202ENST00000553744 KDM3AQ9Y4C1 1321 aa13.29□□□□□ -0.28
TMEM253-202ENST00000553744 TTC28Q96AY4 2481 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 ZBBXA8MT70 800 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 MED24O75448 989 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 GHRP10912 638 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
TMEM253-202ENST00000553744 RPA1P27694 616 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 NPEPPSP55786 919 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 PDIA5Q14554 519 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 IL17AQ16552 155 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 TCTN1Q2MV58 587 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
TMEM253-202ENST00000553744 GPR153Q6NV75 609 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 SPRYD3Q8NCJ5 442 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 CEP170P1Q96L14 293 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
TMEM253-202ENST00000553744 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
TMEM253-202ENST00000553744 LRWD1Q9UFC0 647 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 SQORQ9Y6N5 450 aa13.28□□□□□ -0.28
TMEM253-202ENST00000553744 TET1Q8NFU7 2136 aa13.27□□□□□ -0.28
TMEM253-202ENST00000553744 RBAK-RBAKDNI3L0D1 243 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 ZBTB39O15060 712 aa13.27□□□□□ -0.29
TMEM253-202ENST00000553744 MAFO75444 373 aaPredicted RBP13.27□□□□□ -0.29
TMEM253-202ENST00000553744 VTNP04004 478 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms