RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 TPH2Q8IWU9 490 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 METTL13Q8N6R0 699 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 MTMR6Q9Y217 621 aa25.58■■□□□ 1.69
TDP1-206ENST00000553569 STX6O43752 255 aa25.57■■□□□ 1.68
TDP1-206ENST00000553569 MRPS6P82932 125 aaKnown RBP25.57■■□□□ 1.68
TDP1-206ENST00000553569 CDY2AQ9Y6F7 541 aa25.57■■□□□ 1.68
TDP1-206ENST00000553569 ZBBXA8MT70 800 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 TBC1D8BQ0IIM8 1120 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 RESTQ13127 1097 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 ANO5Q75V66 913 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 NEK9Q8TD19 979 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 HERVK_113Q902F9 699 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 NIFKQ9BYG3 293 aaKnown RBP25.56■■□□□ 1.68
TDP1-206ENST00000553569 MTIF3Q9H2K0 278 aaKnown RBP25.56■■□□□ 1.68
TDP1-206ENST00000553569 ZSWIM4Q9H7M6 989 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 ARID2Q68CP9 1835 aa25.56■■□□□ 1.68
TDP1-206ENST00000553569 M0QZ92 97 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 MAGEB2O15479 319 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 CHRNA1P02708 482 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 CXCL10P02778 98 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 RPLP2P05387 115 aaKnown RBP25.55■■□□□ 1.68
TDP1-206ENST00000553569 ACTN1P12814 892 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 CLCN3P51790 818 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 MGAT3Q09327 533 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 TARBP2Q15633 366 aaKnown RBP25.55■■□□□ 1.68
TDP1-206ENST00000553569 FAM26DQ5JW98 314 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 C4orf19Q8IY42 314 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 LRRC71Q8N4P6 559 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 PPP1R16BQ96T49 567 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 OSBPL7Q9BZF2 842 aa25.55■■□□□ 1.68
TDP1-206ENST00000553569 CXXC1Q9P0U4 656 aaPredicted RBP25.55■■□□□ 1.68
TDP1-206ENST00000553569 LAD1O00515 517 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 SOX1O00570 391 aaPredicted RBP25.54■■□□□ 1.68
TDP1-206ENST00000553569 SLITRK3O94933 977 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 GHRP10912 638 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 YWHABP31946 246 aaKnown RBP25.54■■□□□ 1.68
TDP1-206ENST00000553569 FXR2P51116 673 aaKnown RBP eCLIP25.54■■□□□ 1.68
TDP1-206ENST00000553569 NPEPPSP55786 919 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 LRIT3Q3SXY7 679 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 EFCAB12Q6NXP0 572 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 KIAA0319LQ8IZA0 1049 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 ERMNQ8TAM6 284 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 HSD17B14Q9BPX1 270 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 SUGCTQ9HAC7 445 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 TRPV2Q9Y5S1 764 aa25.54■■□□□ 1.68
TDP1-206ENST00000553569 LOXHD1Q8IVV2 1947 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 ATP2C1P98194 919 aaPredicted RBP25.53■■□□□ 1.68
TDP1-206ENST00000553569 TCTN1Q2MV58 587 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 IER5Q5VY09 327 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 CNKSR3Q6P9H4 555 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 CEP170P1Q96L14 293 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 CYP26B1Q9NR63 512 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 AKT3Q9Y243 479 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 GINS2Q9Y248 185 aa25.53■■□□□ 1.68
TDP1-206ENST00000553569 ZBTB39O15060 712 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 MED24O75448 989 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 VTNP04004 478 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 PRPHP41219 470 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 RASIP1Q5U651 963 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 FOXD4L5Q5VV16 416 aaPredicted RBP25.52■■□□□ 1.68
TDP1-206ENST00000553569 FAM173BQ6P4H8 233 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 DTHD1Q6ZMT9 781 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 NME8Q8N427 588 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 ZNF579Q8NAF0 562 aaKnown RBP25.52■■□□□ 1.68
TDP1-206ENST00000553569 FOXD4L4Q8WXT5 416 aaPredicted RBP25.52■■□□□ 1.68
TDP1-206ENST00000553569 CEP89Q96ST8 783 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 MAP7D2Q96T17 732 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 LRWD1Q9UFC0 647 aa25.52■■□□□ 1.68
TDP1-206ENST00000553569 TMOD1P28289 359 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 FXR1P51114 621 aaKnown RBP eCLIP25.51■■□□□ 1.67
TDP1-206ENST00000553569 IL17AQ16552 155 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 XKR9Q5GH70 373 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 OTUD6AQ7L8S5 288 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 LINC01465Q8N7H1 131 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 DBF4BQ8NFT6 615 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 LRCH3Q96II8 777 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 RAB34Q9BZG1 259 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 TUFT1Q9NNX1 390 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 BMP2KQ9NSY1 1161 aaPredicted RBP25.51■■□□□ 1.67
TDP1-206ENST00000553569 MYH15Q9Y2K3 1946 aa25.51■■□□□ 1.67
TDP1-206ENST00000553569 A0A087WWV3 80 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 SPATA31C1P0DKV0 1188 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 LPIN1Q14693 890 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 SF3A1Q15459 793 aaKnown RBP25.5■■□□□ 1.67
TDP1-206ENST00000553569 PLEKHG4Q58EX7 1191 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 FBXO47Q5MNV8 452 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 HAUS3Q68CZ6 603 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 FAM109BQ6ICB4 259 aaPredicted RBP25.5■■□□□ 1.67
TDP1-206ENST00000553569 CATSPER3Q86XQ3 398 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 SEPT8Q92599 483 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 CCDC43Q96MW1 224 aaKnown RBP25.5■■□□□ 1.67
TDP1-206ENST00000553569 POLR3CQ9BUI4 534 aaPredicted RBP25.5■■□□□ 1.67
TDP1-206ENST00000553569 CELF4Q9BZC1 486 aaKnown RBP25.5■■□□□ 1.67
TDP1-206ENST00000553569 SLC4A7Q9Y6M7 1214 aa25.5■■□□□ 1.67
TDP1-206ENST00000553569 VWA3AA6NCI4 1184 aa25.49■■□□□ 1.67
TDP1-206ENST00000553569 PP2D1A8MPX8 630 aa25.49■■□□□ 1.67
TDP1-206ENST00000553569 BAIAP3O94812 1187 aa25.49■■□□□ 1.67
TDP1-206ENST00000553569 LYPLA2O95372 231 aa25.49■■□□□ 1.67
TDP1-206ENST00000553569 CCT6AP40227 531 aaKnown RBP25.49■■□□□ 1.67
TDP1-206ENST00000553569 POLGP54098 1239 aaPredicted RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms