RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CDHR1Q96JP9 859 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 EIF2AK1Q9BQI3 630 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF577Q9BSK1 485 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 SRRTQ9BXP5 876 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 GLIS2Q9BZE0 524 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 EDEM3Q9BZQ6 932 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 RPAP3Q9H6T3 665 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 JADE2Q9NQC1 790 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 OLFML3Q9NRN5 406 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 GGA3Q9NZ52 723 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 COL4A3BPQ9Y5P4 624 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 UBIAD1Q9Y5Z9 338 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 FER1L6Q2WGJ9 1857 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 UBE4BO95155 1302 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 A0A1W2PQJ5 194 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 UNCXA6NJT0 531 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 IPO5O00410 1097 aaKnown RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 MFAP3LO75121 409 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 MED24O75448 989 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 LYPLA2O95372 231 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 SPATA31C1P0DKV0 1188 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 TNNT1P13805 278 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 IDEP14735 1019 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 SFNP31947 248 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 COPB2P35606 906 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 UBXN1Q04323 297 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ALCAMQ13740 583 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ARID5BQ14865 1188 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ECM1Q16610 540 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 BMT2Q1RMZ1 405 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ZCWPW2Q504Y3 356 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 HERC4Q5GLZ8 1057 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ANKRD40Q6AI12 368 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 DYMQ7RTS9 669 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 KCNK18Q7Z418 384 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 IRF2BP1Q8IU81 584 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ZC3H3Q8IXZ2 948 aaKnown RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 SLC17A8Q8NDX2 589 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF397Q8NF99 534 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF507Q8TCN5 953 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 SYTL5Q8TDW5 730 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 DCPSQ96C86 337 aaKnown RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 CNOT6LQ96LI5 555 aaKnown RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 AGBL1Q96MI9 1066 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ERGIC2Q96RQ1 377 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 DUSP9Q99956 384 aaKnown RBP8.09□□□□□ -1.11
ATXN3-221ENST00000553498 TUBGCP2Q9BSJ2 902 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 TEX13BQ9BXU2 312 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 SLC39A2Q9NP94 309 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ATP13A2Q9NQ11 1180 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 FBXO28Q9NVF7 368 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 FAM184BQ9ULE4 1060 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ODF2LQ9ULJ1 636 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 ZHX2Q9Y6X8 837 aa8.09□□□□□ -1.11
ATXN3-221ENST00000553498 E9PMD0 336 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 EIF3DO15371 548 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TEX33O43247 280 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TBCAO75347 108 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 SLITRK3O94933 977 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 FCER1AP12319 257 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 ALAS1P13196 640 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TIMP2P16035 220 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 SCP2P22307 547 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 GUCY2CP25092 1073 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 RPL13P26373 211 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 ABCD1P33897 745 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 NF2P35240 595 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 IREB2P48200 963 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 JAK3P52333 1124 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 PTK2Q05397 1052 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 GIT2Q14161 759 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 NFIL3Q16649 462 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 MAN2A1Q16706 1144 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 E4F1Q66K89 784 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CYP26C1Q6V0L0 522 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CATSPERGQ6ZRH7 1159 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TMEM139Q8IV31 216 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 MYRIPQ8NFW9 859 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 KIF18AQ8NI77 898 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 GOLGA5Q8TBA6 731 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TMEM174Q8WUU8 243 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 TRERF1Q96PN7 1200 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 SENP7Q9BQF6 1050 aa8.08□□□□□ -1.12
ATXN3-221ENST00000553498 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms