RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TOP1P11387 765 aaKnown RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 PLA2G4AP47712 749 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 MRE11P49959 708 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 NHLH1Q02575 133 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 SRSF11Q05519 484 aaKnown RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 ZNF543Q08ER8 600 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 C1orf216Q8TAB5 229 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 OTUD7AQ8TE49 926 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 ZDHHC1Q8WTX9 485 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 FSD1Q9BTV5 496 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
ATXN3-219ENST00000553488 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 TCP11L1Q9NUJ3 509 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 NDFIP2Q9NV92 336 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 COL20A1Q9P218 1284 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 HDAC6Q9UBN7 1215 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 PNMA2Q9UL42 364 aa8.54□□□□□ -1.04
ATXN3-219ENST00000553488 WDR87Q6ZQQ6 2873 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 DCXO43602 365 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 EFCAB14O75071 495 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 GH1P01241 217 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ALADP13716 330 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ZP2Q05996 745 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 PTK7Q13308 1070 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 LY6KQ17RY6 165 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ZNF618Q5T7W0 954 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-219ENST00000553488 FAM117BQ6P1L5 589 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-219ENST00000553488 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 MRPL38Q96DV4 380 aaKnown RBP8.53□□□□□ -1.04
ATXN3-219ENST00000553488 MPHOSPH6Q99547 160 aaKnown RBP8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ZMYND15Q9H091 742 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 RUBCNLQ9H714 662 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 ZMYM6O95789 1325 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 TTC3P53804 2025 aa8.53□□□□□ -1.04
ATXN3-219ENST00000553488 LOXHD1Q8IVV2 1947 aa8.52□□□□□ -1.04
ATXN3-219ENST00000553488 BAZ2BQ9UIF8 2168 aaKnown RBP8.52□□□□□ -1.04
ATXN3-219ENST00000553488 H3BQ06 376 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-219ENST00000553488 LGR5O75473 907 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 ZNF286BP0CG31 522 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 HOXC8P31273 242 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 CHMP4BP1P59074 171 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 IKBKEQ14164 716 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 TEAD4Q15561 434 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 ALX1Q15699 326 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 DGKDQ16760 1214 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 USH1GQ495M9 461 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 SYTL5Q8TDW5 730 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-219ENST00000553488 TBC1D5Q92609 795 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 FBXL18Q96ME1 805 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 MAF1Q9H063 256 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 KCNH6Q9H252 994 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 CPVLQ9H3G5 476 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 INSL6Q9Y581 213 aa8.52□□□□□ -1.05
ATXN3-219ENST00000553488 B4DLN1 442 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 H3BNC9 293 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 LINC00271P0C7V0 271 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 GOLGA8HP0CJ92 632 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 CASTP20810 708 aaKnown RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 LTBRP36941 435 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 ZNF200P98182 395 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 CDC37Q16543 378 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 KIAA0753Q2KHM9 967 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 EPC2Q52LR7 807 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 PLEKHG4Q58EX7 1191 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 TCEAL5Q5H9L2 206 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 SEPT14Q6ZU15 432 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 CHST3Q7LGC8 479 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 SERINC5Q86VE9 423 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 MYOCDQ8IZQ8 938 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 C7orf31Q8N865 590 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 DBF4BQ8NFT6 615 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 WHAMMQ8TF30 809 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 PABPC5Q96DU9 382 aaKnown RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 TAAR1Q96RJ0 339 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 ALG1Q9BT22 464 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 KATNAL1Q9BW62 490 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 PRKAG3Q9UGI9 489 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 DDX41Q9UJV9 622 aaKnown RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 ZFHX2Q9C0A1 2572 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 ABCB11O95342 1321 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 EMSYQ7Z589 1322 aa8.51□□□□□ -1.05
ATXN3-219ENST00000553488 RIF1Q5UIP0 2472 aaKnown RBP8.51□□□□□ -1.05
ATXN3-219ENST00000553488 A0A0D9SFI3 127 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-219ENST00000553488 OPLAHO14841 1288 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 FGAP02671 866 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 AMHP03971 560 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 MX1P20591 662 aa8.5□□□□□ -1.05
ATXN3-219ENST00000553488 PLXNA3P51805 1871 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms