RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 BANK1Q8NDB2 785 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 LXNQ9BS40 222 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 FAM49AQ9H0Q0 323 aaPredicted RBP20.71■□□□□ 0.91
CPSF2-202ENST00000553427 SQORQ9Y6N5 450 aa20.71■□□□□ 0.91
CPSF2-202ENST00000553427 SZT2Q5T011 3432 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.7■□□□□ 0.9
CPSF2-202ENST00000553427 ABHD14A-ACY1A0A1B0GW23 586 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.7■□□□□ 0.9
CPSF2-202ENST00000553427 LYPLA2O95372 231 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 ANO5Q75V66 913 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 BRAPQ7Z569 592 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 KIAA0319LQ8IZA0 1049 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 ZNF710Q8N1W2 664 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 CEP89Q96ST8 783 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 HSD17B14Q9BPX1 270 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 ZSWIM4Q9H7M6 989 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.7■□□□□ 0.9
CPSF2-202ENST00000553427 SEPT9Q9UHD8 586 aaPredicted RBP20.7■□□□□ 0.9
CPSF2-202ENST00000553427 PCDHB6Q9Y5E3 794 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 TRPV2Q9Y5S1 764 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 CDY2AQ9Y6F7 541 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 SLC4A7Q9Y6M7 1214 aa20.7■□□□□ 0.9
CPSF2-202ENST00000553427 M0QZ92 97 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 FXR2P51116 673 aaKnown RBP eCLIP20.69■□□□□ 0.9
CPSF2-202ENST00000553427 MKRN4PQ13434 485 aaPredicted RBP20.69■□□□□ 0.9
CPSF2-202ENST00000553427 NBR1Q14596 966 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 FAM43BQ6ZT52 329 aaPredicted RBP20.69■□□□□ 0.9
CPSF2-202ENST00000553427 USP38Q8NB14 1042 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 PHOSPHO2Q8TCD6 241 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 SEPT8Q92599 483 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 APBB2Q92870 758 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 EIF2AK1Q9BQI3 630 aaKnown RBP20.69■□□□□ 0.9
CPSF2-202ENST00000553427 RGL1Q9NZL6 768 aa20.69■□□□□ 0.9
CPSF2-202ENST00000553427 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
CPSF2-202ENST00000553427 SLITRK3O94933 977 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 PRPHP41219 470 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 TBC1D8BQ0IIM8 1120 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 FBXO47Q5MNV8 452 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 FAM109BQ6ICB4 259 aaPredicted RBP20.68■□□□□ 0.9
CPSF2-202ENST00000553427 DYDC2Q96IM9 177 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 SLC9A7Q96T83 725 aa20.68■□□□□ 0.9
CPSF2-202ENST00000553427 SIP14410 1827 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TMEM265A0A087WTH1 108 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 IGKV6-21A0A0C4DH24 114 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 POTEMA6NI47 508 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 ZBBXA8MT70 800 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 SYT1P21579 422 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TMOD1P28289 359 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 PTGDRQ13258 359 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 IKBKEQ14164 716 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 LPIN1Q14693 890 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TMEM266Q2M3C6 531 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TCTN1Q2MV58 587 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TSHZ1Q6ZSZ6 1077 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TRMT1LQ7Z2T5 733 aaKnown RBP20.67■□□□□ 0.9
CPSF2-202ENST00000553427 DBF4BQ8NFT6 615 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 JPH2Q9BR39 696 aaPredicted RBP20.67■□□□□ 0.9
CPSF2-202ENST00000553427 IFIH1Q9BYX4 1025 aaKnown RBP20.67■□□□□ 0.9
CPSF2-202ENST00000553427 CELF4Q9BZC1 486 aaKnown RBP20.67■□□□□ 0.9
CPSF2-202ENST00000553427 TUFT1Q9NNX1 390 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 CYP26B1Q9NR63 512 aa20.67■□□□□ 0.9
CPSF2-202ENST00000553427 VPS37CA5D8V6 355 aaPredicted RBP20.66■□□□□ 0.9
CPSF2-202ENST00000553427 ATP2A2P16615 1042 aaKnown RBP20.66■□□□□ 0.9
CPSF2-202ENST00000553427 YWHABP31946 246 aaKnown RBP20.66■□□□□ 0.9
CPSF2-202ENST00000553427 WDR5P61964 334 aaKnown RBP20.66■□□□□ 0.9
CPSF2-202ENST00000553427 CYP4A11Q02928 519 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 MTERF2Q49AM1 385 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 EFCAB12Q6NXP0 572 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 OTUD6AQ7L8S5 288 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 EXOC8Q8IYI6 725 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 METTL13Q8N6R0 699 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 ERMNQ8TAM6 284 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 MAP7D2Q96T17 732 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 POLR3CQ9BUI4 534 aaPredicted RBP20.66■□□□□ 0.9
CPSF2-202ENST00000553427 OSBPL7Q9BZF2 842 aa20.66■□□□□ 0.9
CPSF2-202ENST00000553427 TMEM150BA6NC51 233 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 MAFO75444 373 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-202ENST00000553427 GHRP10912 638 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 MUTP22033 750 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 RFC5P40937 340 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 TECP42680 631 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 KCNJ6P48051 423 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 CLCN3P51790 818 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 ATP2C1P98194 919 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-202ENST00000553427 CTTNQ14247 550 aaKnown RBP20.65■□□□□ 0.9
CPSF2-202ENST00000553427 PDIA5Q14554 519 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 PLA2G4FQ68DD2 849 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 IGSF22Q8N9C0 903 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 RAB34Q9BZG1 259 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 ANKEF1Q9NU02 776 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 STK24Q9Y6E0 443 aa20.65■□□□□ 0.9
CPSF2-202ENST00000553427 GAS2O43903 313 aaKnown RBP20.64■□□□□ 0.89
CPSF2-202ENST00000553427 BMP15O95972 392 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 SPATA31C1P0DKV0 1188 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.89
CPSF2-202ENST00000553427 PDIA4P13667 645 aaKnown RBP20.64■□□□□ 0.89
CPSF2-202ENST00000553427 RPA1P27694 616 aa20.64■□□□□ 0.89
CPSF2-202ENST00000553427 TMEM62Q0P6H9 643 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms