RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ENPP3O14638 875 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 MAGEB2O15479 319 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 CHMP2AO43633 222 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 C22orf31O95567 290 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 CD52P31358 61 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 GRB10Q13322 594 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 TRMT1LQ7Z2T5 733 aaKnown RBP14.62□□□□□ -0.07
ACTN1-207ENST00000553290 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 SPRED2Q7Z698 418 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 ATXN2LQ8WWM7 1075 aaKnown RBP14.62□□□□□ -0.07
ACTN1-207ENST00000553290 NAP1L4Q99733 375 aaKnown RBP14.62□□□□□ -0.07
ACTN1-207ENST00000553290 UNC45AQ9H3U1 944 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 AGO3Q9H9G7 860 aaKnown RBP14.62□□□□□ -0.07
ACTN1-207ENST00000553290 THEGQ9P2T0 379 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 DDX25Q9UHL0 483 aaKnown RBP14.62□□□□□ -0.07
ACTN1-207ENST00000553290 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 PADI3Q9ULW8 664 aa14.62□□□□□ -0.07
ACTN1-207ENST00000553290 COL4A6Q14031 1691 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 PRRC2BQ5JSZ5 2229 aaKnown RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 LPXNO60711 386 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 LARGE1O95461 756 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 OATP04181 439 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 FDPSP14324 419 aaKnown RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 GCFC2P16383 781 aaKnown RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 PAK2Q13177 524 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 LETM2Q2VYF4 491 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 ODR4Q5SWX8 454 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 PPP4R3AQ6IN85 833 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 FBXO22Q8NEZ5 403 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 ETNPPLQ8TBG4 499 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 SYMPKQ92797 1274 aaKnown RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 FAM20AQ96MK3 541 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 COL25A1Q9BXS0 654 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 SUGCTQ9HAC7 445 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 BRMS1Q9HCU9 246 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 PRDM6Q9NQX0 595 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 TTC3P53804 2025 aa14.61□□□□□ -0.07
ACTN1-207ENST00000553290 COL4A4P53420 1690 aaPredicted RBP14.61□□□□□ -0.07
ACTN1-207ENST00000553290 ZNF862O60290 1169 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 TMOD1P28289 359 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 PRKCEQ02156 737 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 TJAP1Q5JTD0 557 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 B3GNT9Q6UX72 402 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 PIK3AP1Q6ZUJ8 805 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 ZNF710Q8N1W2 664 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 METTL13Q8N6R0 699 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 OXER1Q8TDS5 423 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 GDPD5Q8WTR4 605 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 GJA10Q969M2 543 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 C17orf80Q9BSJ5 609 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 GJB4Q9NTQ9 266 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 GINS2Q9Y248 185 aa14.6□□□□□ -0.07
ACTN1-207ENST00000553290 CUL9Q8IWT3 2517 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 TBX3O15119 743 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 SLC37A4O43826 429 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 RPS6KA5O75582 802 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 KRT2P35908 639 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 CRYBB1P53674 252 aaPredicted RBP14.59□□□□□ -0.07
ACTN1-207ENST00000553290 MRPS5P82675 430 aaKnown RBP14.59□□□□□ -0.07
ACTN1-207ENST00000553290 SKIV2LQ15477 1246 aaKnown RBP14.59□□□□□ -0.07
ACTN1-207ENST00000553290 UGCGQ16739 394 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 EPC2Q52LR7 807 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 KRT40Q6A162 431 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 FIBCD1Q8N539 461 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
ACTN1-207ENST00000553290 LINC01599Q8WXQ3 324 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 MAP7D2Q96T17 732 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 KCNMB3Q9NPA1 279 aa14.59□□□□□ -0.07
ACTN1-207ENST00000553290 GPR182O15218 404 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 DTNBO60941 627 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 GPR32O75388 356 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 VTNP04004 478 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 STAG3L1P0CL83 205 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 NFX1Q12986 1120 aaKnown RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 PPP2R5CQ13362 524 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 TRIM29Q14134 588 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 KIZQ2M2Z5 673 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 TMEM266Q2M3C6 531 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 XKR3Q5GH77 459 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 EFCAB12Q6NXP0 572 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 RTN4RL1Q86UN2 441 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 NPAS4Q8IUM7 802 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 TMEM192Q8IY95 271 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 ZNF689Q96CS4 500 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 ASB2Q96Q27 587 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 NIFKQ9BYG3 293 aaKnown RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 CDHR5Q9HBB8 845 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 RC3H2Q9HBD1 1191 aaKnown RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 ERVK-5Q9HDB9 667 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 AKT3Q9Y243 479 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 NOC2LQ9Y3T9 749 aaKnown RBP14.58□□□□□ -0.08
ACTN1-207ENST00000553290 RWDD3Q9Y3V2 267 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 RALGAPA2Q2PPJ7 1873 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 NLRC5Q86WI3 1866 aa14.58□□□□□ -0.08
ACTN1-207ENST00000553290 VCANP13611 3396 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms