RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 CCDC26Q8TAB7 109 aa8.51□□□□□ -1.05
SYT1-212ENST00000552744 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
SYT1-212ENST00000552744 SYN2Q92777 582 aaPredicted RBP8.51□□□□□ -1.05
SYT1-212ENST00000552744 SGSM3Q96HU1 749 aa8.51□□□□□ -1.05
SYT1-212ENST00000552744 PBKQ96KB5 322 aa8.51□□□□□ -1.05
SYT1-212ENST00000552744 PSMD1Q99460 953 aa8.51□□□□□ -1.05
SYT1-212ENST00000552744 BCAS3Q9H6U6 928 aa8.51□□□□□ -1.05
SYT1-212ENST00000552744 ARMCX3Q9UH62 379 aaPredicted RBP8.51□□□□□ -1.05
SYT1-212ENST00000552744 SRP68Q9UHB9 627 aaKnown RBP8.51□□□□□ -1.05
SYT1-212ENST00000552744 USP17L15C9J2P7 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L13C9JLJ4 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L11C9JVI0 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L18D6R9N7 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L22D6RA61 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 H2AFZP0C0S5 128 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 KRT13P13646 458 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 PABPC4Q13310 644 aaKnown RBP eCLIP8.5□□□□□ -1.05
SYT1-212ENST00000552744 PDIA5Q14554 519 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 IFI16Q16666 785 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 TTBK2Q6IQ55 1244 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 USP17L6PQ6QN14 398 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 LRIG3Q6UXM1 1119 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 H2AFVQ71UI9 128 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 TAX1BP1Q86VP1 789 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 HAS1Q92839 578 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 FMO2Q99518 471 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 LRRC27Q9C0I9 530 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 GANQ9H2C0 597 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 IKZF4Q9H2S9 585 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 AJAP1Q9UKB5 411 aaPredicted RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 CCDC88AQ3V6T2 1871 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 FLOT1O75955 427 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 VIMP08670 466 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 MYBP10242 640 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 XRCC5P13010 732 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 EZRP15311 586 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 CASP4P49662 377 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 DDB1Q16531 1140 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 NBPF9Q3BBW0 867 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 MEX3CQ5U5Q3 659 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 EMC10Q5UCC4 262 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 GLYCTKQ8IVS8 523 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 LRRC57Q8N9N7 239 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 ACTRT1Q8TDG2 376 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 ARHGEF1Q92888 912 aaKnown RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 ACTR5Q9H9F9 607 aaPredicted RBP8.5□□□□□ -1.05
SYT1-212ENST00000552744 VEZTQ9HBM0 779 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 ZNF287Q9HBT7 754 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 BCS1LQ9Y276 419 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 SNX24Q9Y343 169 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 CD2APQ9Y5K6 639 aa8.5□□□□□ -1.05
SYT1-212ENST00000552744 MYH14Q7Z406 1995 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 F8VZ95 297 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 BUB1BO60566 1050 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 GNA14O95837 355 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 MMEP08473 750 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CHN1P15882 459 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 PON1P27169 355 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 GBP2P32456 591 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 PSMC6P62333 389 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 BYSLQ13895 437 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 PREPLQ4J6C6 727 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 AADACL2Q6P093 401 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 TBC1D1Q86TI0 1168 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 MGARPQ8TDB4 240 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 TATDN2Q93075 761 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CHMP6Q96FZ7 201 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CEP63Q96MT8 703 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 ELAC2Q9BQ52 826 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 ANKRD2Q9GZV1 360 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 TSPYL2Q9H2G4 693 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 GCNT4Q9P109 453 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 TMEM110-MUSTN1A8MSY1 372 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 AFPP02771 609 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CYP11B2P19099 503 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 RXRBP28702 533 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 CLNS1AP54105 237 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 GALCP54803 685 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 IFI35P80217 286 aaPredicted RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 KCNA1Q09470 495 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 NFIXQ14938 502 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 NAA25Q14CX7 972 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 TMEM119Q4V9L6 283 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 UBAP2Q5T6F2 1119 aaKnown RBP8.49□□□□□ -1.05
SYT1-212ENST00000552744 KCTD1Q719H9 257 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
SYT1-212ENST00000552744 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms