RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RRP1P56182 461 aaKnown RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 SIGLEC14Q08ET2 396 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 ADAM15Q13444 863 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 PLEKHG4Q58EX7 1191 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 DHX37Q8IY37 1157 aaKnown RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 FIBCD1Q8N539 461 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 DNERQ8NFT8 737 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 DCAF4Q8WV16 495 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 SEPT8Q92599 483 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 APPBP2Q92624 585 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 TOP1MTQ969P6 601 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 IL17RAQ96F46 866 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 FSD1Q9BTV5 496 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 KATNAL1Q9BW62 490 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 IRF2BPLQ9H1B7 796 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 INCENPQ9NQS7 918 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 IL17RBQ9NRM6 502 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 PRR23AA6NEV1 266 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 PATL2C9JE40 543 aaKnown RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 C5orf67F2Z3F1 127 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 HAS3O00219 553 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 RNF113AO15541 343 aaKnown RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 SORBS3O60504 671 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 RANBP6O60518 1105 aaKnown RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 RAB11FIP3O75154 756 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 HMMRO75330 724 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 EYA4O95677 639 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 F2P00734 622 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 PDGFBP01127 241 aaPredicted RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 RB1P06400 928 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 BMPR1AP36894 532 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 CTDSPL2Q05D32 466 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 PPARAQ07869 468 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 CBX2Q14781 532 aaPredicted RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 USH1GQ495M9 461 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 INTS6LQ5JSJ4 861 aaKnown RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 BTNL9Q6UXG8 535 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 ERMP1Q7Z2K6 904 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 SERINC5Q86VE9 423 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 KRTAP1-3Q8IUG1 177 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 KBTBD3Q8NAB2 608 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 TBC1D5Q92609 795 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 ASIC4Q96FT7 647 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 MSLNLQ96KJ4 702 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 RPGRIP1Q96KN7 1286 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 NACAP1Q9BZK3 213 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 LMAN2LQ9H0V9 348 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 NAPBQ9H115 298 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 CUEDC1Q9NWM3 386 aaPredicted RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 USP15Q9Y4E8 981 aaPredicted RBP6.3□□□□□ -1.4
HOXB3-213ENST00000552000 DOCK5Q9H7D0 1870 aa6.3□□□□□ -1.4
HOXB3-213ENST00000552000 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 KIAA1671Q9BY89 1806 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 PROB1E7EW31 1015 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 SMARCA5O60264 1052 aaPredicted RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 LINC00271P0C7V0 271 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 ID4P47928 161 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 CAMK1Q14012 370 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 FOXD4L5Q5VV16 416 aaPredicted RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 TSHZ3Q63HK5 1081 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 ADGRD2Q7Z7M1 963 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 SMRP1Q8NCR6 262 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 PPTC7Q8NI37 304 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 ATP6V0A1Q93050 837 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 PPP2R3CQ969Q6 453 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 TAAR1Q96RJ0 339 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 CLEC1BQ9P126 229 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 BARX2Q9UMQ3 279 aaPredicted RBP6.29□□□□□ -1.4
HOXB3-213ENST00000552000 RWDD3Q9Y3V2 267 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 F5P12259 2224 aa6.29□□□□□ -1.4
HOXB3-213ENST00000552000 IGF2RP11717 2491 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 ADGRA3Q8IWK6 1321 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 WDR19Q8NEZ3 1342 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 C17orf102A2RUQ5 167 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 TREHO43280 583 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 GLP2RO95838 553 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 MMP1P03956 469 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 ADH1AP07327 375 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 ZFYP08048 801 aaPredicted RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 TOP1P11387 765 aaKnown RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 HOXD8P13378 290 aaPredicted RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 EIF2AK2P19525 551 aaKnown RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 DNAJB1P25685 340 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 NBL1P41271 181 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 NRIP1P48552 1158 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 LAMC2Q13753 1193 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 BTG3Q14201 252 aaPredicted RBP6.28□□□□□ -1.4
HOXB3-213ENST00000552000 STXBP2Q15833 593 aa6.28□□□□□ -1.4
HOXB3-213ENST00000552000 PDXDC2PQ6P474 469 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms