RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 FAM43BQ6ZT52 329 aaPredicted RBP21.39■■□□□ 1.01
DDX54-208ENST00000551344 TMCO2Q7Z6W1 182 aaPredicted RBP21.39■■□□□ 1.01
DDX54-208ENST00000551344 TOP1MTQ969P6 601 aa21.39■■□□□ 1.01
DDX54-208ENST00000551344 INSL6Q9Y581 213 aa21.39■■□□□ 1.01
DDX54-208ENST00000551344 COL6A3P12111 3177 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 CDH23Q9H251 3354 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.38■■□□□ 1.01
DDX54-208ENST00000551344 MARCH6O60337 910 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 BAG4O95429 457 aaKnown RBP21.38■■□□□ 1.01
DDX54-208ENST00000551344 C22orf31O95567 290 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 PRKCEQ02156 737 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 TAP1Q03518 808 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 TMEM62Q0P6H9 643 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 MYOCDQ8IZQ8 938 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 HAS1Q92839 578 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 C8orf76Q96K31 380 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 GBF1Q92538 1859 aa21.38■■□□□ 1.01
DDX54-208ENST00000551344 FAM205CA6NFA0 338 aa21.37■■□□□ 1.01
DDX54-208ENST00000551344 UGCGQ16739 394 aa21.37■■□□□ 1.01
DDX54-208ENST00000551344 XKR3Q5GH77 459 aa21.37■■□□□ 1.01
DDX54-208ENST00000551344 ZNF710Q8N1W2 664 aa21.37■■□□□ 1.01
DDX54-208ENST00000551344 METTL13Q8N6R0 699 aa21.37■■□□□ 1.01
DDX54-208ENST00000551344 MAFAQ8NHW3 353 aaPredicted RBP21.37■■□□□ 1.01
DDX54-208ENST00000551344 NIFKQ9BYG3 293 aaKnown RBP21.37■■□□□ 1.01
DDX54-208ENST00000551344 AGO3Q9H9G7 860 aaKnown RBP21.37■■□□□ 1.01
DDX54-208ENST00000551344 ENPP3O14638 875 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 TMOD1P28289 359 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 FOSBP53539 338 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 PSMC5P62195 406 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 FAM117BQ6P1L5 589 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 FAM184AQ8NB25 1140 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 SLC17A8Q8NDX2 589 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 FBXO18Q8NFZ0 1043 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 FTHL17Q9BXU8 183 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 VAV3Q9UKW4 847 aa21.36■■□□□ 1.01
DDX54-208ENST00000551344 RBAK-RBAKDNI3L0D1 243 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 EML1O00423 815 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 DKC1O60832 514 aaKnown RBP eCLIP21.35■■□□□ 1.01
DDX54-208ENST00000551344 CD52P31358 61 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 HTRA4P83105 476 aaPredicted RBP21.35■■□□□ 1.01
DDX54-208ENST00000551344 TARBP2Q15633 366 aaKnown RBP21.35■■□□□ 1.01
DDX54-208ENST00000551344 EFCAB12Q6NXP0 572 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 POTEDQ86YR6 584 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 PADI3Q9ULW8 664 aa21.35■■□□□ 1.01
DDX54-208ENST00000551344 MICAL3Q7RTP6 2002 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 LCHNA4D1U4 455 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 STBD1O95210 358 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 P4HBP07237 508 aaKnown RBP21.34■■□□□ 1.01
DDX54-208ENST00000551344 QARSP47897 775 aaKnown RBP21.34■■□□□ 1.01
DDX54-208ENST00000551344 CRYBB1P53674 252 aaPredicted RBP21.34■■□□□ 1.01
DDX54-208ENST00000551344 GUCY1B3Q02153 619 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 ADGRE1Q14246 886 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 EPHA7Q15375 998 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 ODR4Q5SWX8 454 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 LINC01465Q8N7H1 131 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 TBC1D32Q96NH3 1257 aa21.34■■□□□ 1.01
DDX54-208ENST00000551344 FOXP1Q9H334 677 aaPredicted RBP21.34■■□□□ 1.01
DDX54-208ENST00000551344 ARHGEF15O94989 841 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 UPP2O95045 317 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 MCM2P49736 904 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 TBC1D8BQ0IIM8 1120 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 PAK2Q13177 524 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 BANK1Q8NDB2 785 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 MAP7D2Q96T17 732 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 CERS4Q9HA82 394 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 CDHR5Q9HBB8 845 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 PCDHA12Q9UN75 941 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 GINS2Q9Y248 185 aa21.33■■□□□ 1.01
DDX54-208ENST00000551344 PTPRSQ13332 1948 aa21.33■■□□□ 1
DDX54-208ENST00000551344 CHD9Q3L8U1 2897 aa21.33■■□□□ 1
DDX54-208ENST00000551344 EVPLQ92817 2033 aa21.33■■□□□ 1
DDX54-208ENST00000551344 WDR81Q562E7 1941 aa21.32■■□□□ 1
DDX54-208ENST00000551344 LINC01553A4QN01 128 aa21.32■■□□□ 1
DDX54-208ENST00000551344 DDX11L8A8MPP1 907 aa21.32■■□□□ 1
DDX54-208ENST00000551344 GPR32O75388 356 aa21.32■■□□□ 1
DDX54-208ENST00000551344 RPS6KA5O75582 802 aa21.32■■□□□ 1
DDX54-208ENST00000551344 POU3F3P20264 500 aaPredicted RBP21.32■■□□□ 1
DDX54-208ENST00000551344 IGFBP4P22692 258 aa21.32■■□□□ 1
DDX54-208ENST00000551344 CDC42EP1Q00587 391 aa21.32■■□□□ 1
DDX54-208ENST00000551344 CALCRLQ16602 461 aa21.32■■□□□ 1
DDX54-208ENST00000551344 SP7Q8TDD2 431 aaPredicted RBP21.32■■□□□ 1
DDX54-208ENST00000551344 ARNTL2Q8WYA1 636 aa21.32■■□□□ 1
DDX54-208ENST00000551344 TGS1Q96RS0 853 aaKnown RBP21.32■■□□□ 1
DDX54-208ENST00000551344 YME1L1Q96TA2 773 aa21.32■■□□□ 1
DDX54-208ENST00000551344 SUGCTQ9HAC7 445 aa21.32■■□□□ 1
DDX54-208ENST00000551344 SEPT9Q9UHD8 586 aaPredicted RBP21.32■■□□□ 1
DDX54-208ENST00000551344 GPR182O15218 404 aa21.31■■□□□ 1
DDX54-208ENST00000551344 NEMFO60524 1076 aa21.31■■□□□ 1
DDX54-208ENST00000551344 VTNP04004 478 aa21.31■■□□□ 1
DDX54-208ENST00000551344 CLCN3P51790 818 aa21.31■■□□□ 1
DDX54-208ENST00000551344 ERVK-21P61565 698 aa21.31■■□□□ 1
DDX54-208ENST00000551344 SPIRE1Q08AE8 756 aa21.31■■□□□ 1
DDX54-208ENST00000551344 NFX1Q12986 1120 aaKnown RBP21.31■■□□□ 1
DDX54-208ENST00000551344 KIZQ2M2Z5 673 aa21.31■■□□□ 1
DDX54-208ENST00000551344 RTN4RL1Q86UN2 441 aaPredicted RBP21.31■■□□□ 1
DDX54-208ENST00000551344 TMX3Q96JJ7 454 aa21.31■■□□□ 1
DDX54-208ENST00000551344 CEP89Q96ST8 783 aa21.31■■□□□ 1
DDX54-208ENST00000551344 TSPYL2Q9H2G4 693 aaPredicted RBP21.31■■□□□ 1
DDX54-208ENST00000551344 AKT3Q9Y243 479 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms