RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 UBE2R2Q712K3 238 aaPredicted RBP6.9□□□□□ -1.3
GPN3-209ENST00000551079 OTOP2Q7RTS6 562 aa6.9□□□□□ -1.3
GPN3-209ENST00000551079 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
GPN3-209ENST00000551079 LMF1Q96S06 567 aa6.9□□□□□ -1.3
GPN3-209ENST00000551079 PIF1Q9H611 641 aa6.9□□□□□ -1.3
GPN3-209ENST00000551079 PTPN22Q9Y2R2 807 aa6.9□□□□□ -1.3
GPN3-209ENST00000551079 KRT37O76014 449 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 RANGAP1P46060 587 aaPredicted RBP6.89□□□□□ -1.31
GPN3-209ENST00000551079 CD83Q01151 205 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 PABPC4Q13310 644 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■□□□□ 10
GPN3-209ENST00000551079 ZNF460Q14592 562 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
GPN3-209ENST00000551079 TCEA2Q15560 299 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
GPN3-209ENST00000551079 CATSPEREQ5SY80 951 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 PTPN18Q99952 460 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 ST6GALNAC2Q9UJ37 374 aa6.89□□□□□ -1.31
GPN3-209ENST00000551079 A0A0G2JNJ9 132 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 ZNF20P17024 532 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 SDSP20132 328 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 FNTBP49356 437 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 KCNQ1P51787 676 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 RRADP55042 308 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 RAC3P60763 192 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 ICAM4Q14773 271 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 PIK3R6Q5UE93 754 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 DNERQ8NFT8 737 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 ERCC4Q92889 916 aaPredicted RBP6.88□□□□□ -1.31
GPN3-209ENST00000551079 DVL3Q92997 716 aaPredicted RBP6.88□□□□□ -1.31
GPN3-209ENST00000551079 E2F7Q96AV8 911 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 RNPC3Q96LT9 517 aaKnown RBP6.88□□□□□ -1.31
GPN3-209ENST00000551079 KRTAP3-1Q9BYR8 98 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 INTS7Q9NVH2 962 aaKnown RBP6.88□□□□□ -1.31
GPN3-209ENST00000551079 MAGEC2Q9UBF1 373 aaPredicted RBP6.88□□□□□ -1.31
GPN3-209ENST00000551079 Q9UFV3 132 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 MYRFQ9Y2G1 1151 aa6.88□□□□□ -1.31
GPN3-209ENST00000551079 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 PATE3B3GLJ2 98 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 TRAF5O00463 557 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 JMJD7P0C870 316 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 APEX1P27695 318 aaKnown RBP6.87□□□□□ -1.31
GPN3-209ENST00000551079 KIF11P52732 1056 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 MOGSQ13724 837 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 TMEM200BQ69YZ2 307 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 GIMAP8Q8ND71 665 aaPredicted RBP6.87□□□□□ -1.31
GPN3-209ENST00000551079 APPBP2Q92624 585 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 NEIL1Q96FI4 390 aaPredicted RBP6.87□□□□□ -1.31
GPN3-209ENST00000551079 LRRC37BQ96QE4 947 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 CDK5RAP1Q96SZ6 601 aaKnown RBP6.87□□□□□ -1.31
GPN3-209ENST00000551079 DEF6Q9H4E7 631 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 PCIF1Q9H4Z3 704 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
GPN3-209ENST00000551079 H7C1D1 291 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
GPN3-209ENST00000551079 INSRRP14616 1297 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 MEOX1P50221 254 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 ALDH6A1Q02252 535 aaKnown RBP6.86□□□□□ -1.31
GPN3-209ENST00000551079 ZNF174Q15697 407 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 CDCA2Q69YH5 1023 aaPredicted RBP6.86□□□□□ -1.31
GPN3-209ENST00000551079 RTN4RL1Q86UN2 441 aaPredicted RBP6.86□□□□□ -1.31
GPN3-209ENST00000551079 FOXB1Q99853 325 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 B4GALT6Q9UBX8 382 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
GPN3-209ENST00000551079 C1QTNF3-AMACRE9PGA6 284 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 CBX4O00257 560 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 ZNF623O75123 536 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 CYP17A1P05093 508 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 NFYCQ13952 458 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 RNF151Q2KHN1 245 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 TRIM68Q6AZZ1 485 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 C16orf86Q6ZW13 317 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 GGNQ86UU5 652 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 TAX1BP1Q86VP1 789 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 RTKN2Q8IZC4 609 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 FOXRED1Q96CU9 486 aaPredicted RBP6.85□□□□□ -1.31
GPN3-209ENST00000551079 GNRHR2Q96P88 292 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 KLC2Q9H0B6 622 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 TCAF1Q9Y4C2 921 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 CD2APQ9Y5K6 639 aa6.85□□□□□ -1.31
GPN3-209ENST00000551079 DVL2O14641 736 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 ARHGAP6O43182 974 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 ROM1Q03395 351 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 HS1BP3Q53T59 392 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 AGBL4Q5VU57 503 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 TCTN3Q6NUS6 607 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 LARP4Q71RC2 724 aaKnown RBP eCLIP6.84□□□□□ -1.31
GPN3-209ENST00000551079 NME9Q86XW9 330 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 KIAA1958Q8N8K9 716 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 KIAA1683Q9H0B3 1180 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 SEMA4AQ9H3S1 761 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 MSL2Q9HCI7 577 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 FANCLQ9NW38 375 aa6.84□□□□□ -1.31
GPN3-209ENST00000551079 OAZ3Q9UMX2 235 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms