RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 ARHGAP4P98171 946 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 PURAQ00577 322 aaKnown RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 ITGA7Q13683 1181 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 DGKDQ16760 1214 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 CELF3Q5SZQ8 465 aaKnown RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 JAKMIP3Q5VZ66 844 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 LYPD4Q6UWN0 246 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 METTL7BQ6UX53 244 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 NECAB1Q8N987 351 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 PGBD1Q96JS3 809 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 SPATA33Q96N06 139 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 TBC1D32Q96NH3 1257 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 KIF2CQ99661 725 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 JADE2Q9NQC1 790 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 PRDM5Q9NQX1 630 aaPredicted RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 ORC3Q9UBD5 711 aaPredicted RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
KRR1-204ENST00000550898 PCDHA4Q9UN74 947 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 UBIAD1Q9Y5Z9 338 aa8.09□□□□□ -1.11
KRR1-204ENST00000550898 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.12
KRR1-204ENST00000550898 CTDNEP1O95476 244 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 CLTBP09497 229 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 SYN1P17600 705 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 ITGB5P18084 799 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 MCM2P49736 904 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 SETQ01105 290 aaPredicted RBP8.08□□□□□ -1.12
KRR1-204ENST00000550898 TLE2Q04725 743 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 SEMA3FQ13275 785 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 TRIM29Q14134 588 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 CEP55Q53EZ4 464 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 NIPA1Q7RTP0 329 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 BLIDQ8IZY5 108 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 DAGLBQ8NCG7 672 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 NSUN7Q8NE18 718 aaKnown RBP8.08□□□□□ -1.12
KRR1-204ENST00000550898 TOX2Q96NM4 488 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 LBHD1Q9BQE6 289 aaPredicted RBP8.08□□□□□ -1.12
KRR1-204ENST00000550898 MXRA8Q9BRK3 442 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 ALG1Q9BT22 464 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 TCEAL9Q9UHQ7 104 aa8.08□□□□□ -1.12
KRR1-204ENST00000550898 KIAA0100Q14667 2235 aaKnown RBP8.08□□□□□ -1.12
KRR1-204ENST00000550898 ZBBXA8MT70 800 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 SORBS3O60504 671 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 PPFIA4O75335 1185 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 F2P00734 622 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 CYP3A4P08684 503 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 HOXD8P13378 290 aaPredicted RBP8.07□□□□□ -1.12
KRR1-204ENST00000550898 CDK7P50613 346 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 PSMC6P62333 389 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 HMGN5P82970 282 aaKnown RBP8.07□□□□□ -1.12
KRR1-204ENST00000550898 SP2Q02086 613 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
KRR1-204ENST00000550898 HSDL1Q3SXM5 330 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 FAM47CQ5HY64 1035 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 NFRKBQ6P4R8 1299 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 CYFIP1Q7L576 1253 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 KRT25Q7Z3Z0 450 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 CCDC83Q8IWF9 413 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 FAM126BQ8IXS8 530 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 TMEM151AQ8N4L1 468 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 RASGRP4Q8TDF6 673 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 AIFM3Q96NN9 605 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 SDF4Q9BRK5 362 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 LLPHQ9BRT6 129 aaKnown RBP8.07□□□□□ -1.12
KRR1-204ENST00000550898 PHF20Q9BVI0 1012 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 TMEM39AQ9NV64 488 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 ZNF215Q9UL58 517 aaPredicted RBP8.07□□□□□ -1.12
KRR1-204ENST00000550898 LCTP09848 1927 aa8.07□□□□□ -1.12
KRR1-204ENST00000550898 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 CCDC194A0A1B0GVG4 234 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 JAK2O60674 1132 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 SUPT20HL2P0C7V6 817 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 ZNF286BP0CG31 522 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 RAG1P15918 1043 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 KCNA2P16389 499 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 CIITAP33076 1130 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 KRT2P35908 639 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 MAGEA10P43363 369 aaPredicted RBP8.06□□□□□ -1.12
KRR1-204ENST00000550898 SCTRP47872 440 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
KRR1-204ENST00000550898 CHMP4BP1P59074 171 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 SP4Q02446 784 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 FAAP100Q0VG06 881 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 ST3GAL1Q11201 340 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 NR1H3Q13133 447 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 NONOQ15233 471 aaKnown RBP eCLIP8.06□□□□□ -1.12
KRR1-204ENST00000550898 LYSMD3Q7Z3D4 306 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 PLA2G4DQ86XP0 818 aa8.06□□□□□ -1.12
KRR1-204ENST00000550898 C7orf31Q8N865 590 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms