RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
RAB5C-207ENST00000550504 ZNF215Q9UL58 517 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-207ENST00000550504 NPHP3-ACAD11A0A0J9YXS1 232 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 MYMKA6NI61 221 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 ZEB2O60315 1214 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 KRT18P05783 430 aaKnown RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 RARRES1P49788 294 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 PSEN2P49810 448 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 SLC26A2P50443 739 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 SLC12A3P55017 1021 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 RAD51AP2Q09MP3 1159 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 PNOCQ13519 176 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 POSTNQ15063 836 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 LRRC41Q15345 812 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 DYMQ7RTS9 669 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 RNF180Q86T96 592 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 SYT2Q8N9I0 419 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 ATP8B4Q8TF62 1192 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 KAT2BQ92831 832 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 ZNF333Q96JL9 665 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 FAM167AQ96KS9 214 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 GZF1Q9H116 711 aaPredicted RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 KBTBD4Q9NVX7 518 aa11.46□□□□□ -0.57
RAB5C-207ENST00000550504 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
RAB5C-207ENST00000550504 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.58
RAB5C-207ENST00000550504 GTPBP6O43824 516 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 HBP1O60381 514 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 KPNA6O60684 536 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 USO1O60763 962 aaKnown RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 F2P00734 622 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 ASGR1P07306 291 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 CYP11B2P19099 503 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 CST5P28325 142 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 IGBP1P78318 339 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 NKX3-2P78367 333 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 AMPD3Q01432 767 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 CUL4BQ13620 913 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 MFSD10Q14728 455 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 KIAA0753Q2KHM9 967 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 ARSHQ5FYA8 562 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 RINT1Q6NUQ1 792 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 TRAPPC12Q8WVT3 735 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 DDX12PQ92771 950 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 MTG1Q9BT17 334 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 RUSC1Q9BVN2 902 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 NIFKQ9BYG3 293 aaKnown RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 POLD4Q9HCU8 107 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
RAB5C-207ENST00000550504 CYP26B1Q9NR63 512 aa11.45□□□□□ -0.58
RAB5C-207ENST00000550504 INSRRP14616 1297 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 IDEP14735 1019 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ASIC1P78348 528 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 DPYDQ12882 1025 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 CCSAPQ6IQ19 270 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-207ENST00000550504 C1orf186Q6ZWK4 172 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ELOA2Q8IYF1 753 aaPredicted RBP11.44□□□□□ -0.58
RAB5C-207ENST00000550504 PCSK9Q8NBP7 692 aaKnown RBP11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ARRDC4Q8NCT1 418 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ZBTB10Q96DT7 871 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 KATNAL1Q9BW62 490 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 LRRC27Q9C0I9 530 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ZHX3Q9H4I2 956 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 ARID2Q68CP9 1835 aa11.44□□□□□ -0.58
RAB5C-207ENST00000550504 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 SYCE3A1L190 88 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 RSPH10B2B2RC85 870 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 ZBTB42B2RXF5 422 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 HAS3O00219 553 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 BIN1O00499 593 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 SMC2O95347 1197 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 TFRCP02786 760 aaKnown RBP11.43□□□□□ -0.58
RAB5C-207ENST00000550504 RPN1P04843 607 aaKnown RBP11.43□□□□□ -0.58
RAB5C-207ENST00000550504 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 ACLYP53396 1101 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
RAB5C-207ENST00000550504 SOX10P56693 466 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 TBC1D8BQ0IIM8 1120 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 GIT2Q14161 759 aa11.43□□□□□ -0.58
RAB5C-207ENST00000550504 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
RAB5C-207ENST00000550504 ZNF484Q5JVG2 852 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms