RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 EXOC8Q8IYI6 725 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-217ENST00000550483 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 SCFD2Q8WU76 684 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 FAM167AQ96KS9 214 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 SRRTQ9BXP5 876 aaKnown RBP13.9□□□□□ -0.18
CACNB3-217ENST00000550483 ZHX3Q9H4I2 956 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
CACNB3-217ENST00000550483 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 MAPK8IP1Q9UQF2 711 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 TRAF3IP3Q9Y228 551 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
CACNB3-217ENST00000550483 IGKV6D-21A0A0A0MT36 114 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 PDXKO00764 312 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 DGAT1O75907 488 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 TPM1P09493 284 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SLC26A2P50443 739 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 RTP1P59025 263 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 GRB14Q14449 540 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 NR1I3Q14994 352 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF792Q3KQV3 632 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 MAMDC4Q6UXC1 1216 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 PLEKHH3Q7Z736 793 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 AFAP1L1Q8TED9 768 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SEPT1Q8WYJ6 367 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 PORCNQ9H237 461 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 ST6GALNAC4Q9H4F1 302 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 MRPL44Q9H9J2 332 aaKnown RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 EFCC1Q9HA90 598 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 ZNF302Q9NR11 478 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 WRAP73Q9P2S5 460 aaPredicted RBP13.89□□□□□ -0.19
CACNB3-217ENST00000550483 LCTP09848 1927 aa13.89□□□□□ -0.19
CACNB3-217ENST00000550483 LRRC37A2A6NM11 1700 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 A0A1W2PQC6 194 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 BACH1O14867 736 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 N4BP3O15049 544 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ADORA2AP29274 412 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 COPB1P53618 953 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 PPP2R3AQ06190 1150 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 MKRN3Q13064 507 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 MYBPC2Q14324 1141 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 KRT31Q15323 416 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 TAF1CQ15572 869 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 GPR142Q7Z601 462 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 FAM178BQ8IXR5 827 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 FGD4Q96M96 766 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 PTPN18Q99952 460 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 AZI2Q9H6S1 392 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 MLXIPQ9HAP2 919 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 TYW1Q9NV66 732 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 DDX41Q9UJV9 622 aaKnown RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-217ENST00000550483 CEP290O15078 2479 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
CACNB3-217ENST00000550483 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 CETN3O15182 167 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 HIP1RO75146 1068 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 PGK2P07205 417 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 PLS3P13797 630 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 SFPQP23246 707 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNB3-217ENST00000550483 RFC5P40937 340 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 DNM2P50570 870 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 SMTNP53814 917 aa13.87□□□□□ -0.19
CACNB3-217ENST00000550483 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms