RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 ERCC4Q92889 916 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 SMARCE1Q969G3 411 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 AP5M1Q9H0R1 490 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 BMP2KQ9NSY1 1161 aaPredicted RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 TUBE1Q9UJT0 475 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
CACNB3-216ENST00000550391 PCDHA5Q9Y5H7 936 aa15.72■□□□□ 0.11
CACNB3-216ENST00000550391 MYMKA6NI61 221 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 A6NJR5 290 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
CACNB3-216ENST00000550391 PPFIA4O75335 1185 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 MMP3P08254 477 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 CASP1P29466 404 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 CCND3P30281 292 aaPredicted RBP15.71■□□□□ 0.11
CACNB3-216ENST00000550391 YWHABP31946 246 aaKnown RBP15.71■□□□□ 0.11
CACNB3-216ENST00000550391 GRK4P32298 578 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 PRKCEQ02156 737 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 CUL4BQ13620 913 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 SASS6Q6UVJ0 657 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 OTUD6AQ7L8S5 288 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 SPATA20Q8TB22 786 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 FAM122AQ96E09 287 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 TRIM9Q9C026 710 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 BLZF1Q9H2G9 400 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 SMARCAD1Q9H4L7 1026 aa15.71■□□□□ 0.11
CACNB3-216ENST00000550391 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 OATP04181 439 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 INHAP05111 366 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 LGALS2P05162 132 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 CYP11B2P19099 503 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 CNGA1P29973 690 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 SARSP49591 514 aaKnown RBP15.7■□□□□ 0.1
CACNB3-216ENST00000550391 RARRES1P49788 294 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 SLC26A2P50443 739 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 XKR3Q5GH77 459 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 UTP14CQ5TAP6 766 aaKnown RBP15.7■□□□□ 0.1
CACNB3-216ENST00000550391 NT5DC1Q5TFE4 455 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 ANO5Q75V66 913 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 GLG1Q92896 1179 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 GSDMAQ96QA5 445 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 RNF208Q9H0X6 261 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 ARID2Q68CP9 1835 aa15.7■□□□□ 0.1
CACNB3-216ENST00000550391 TMEM150BA6NC51 233 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 CCL5P13501 91 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 GJA9P57773 515 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 ASIC1P78348 528 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 NKX3-2P78367 333 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 DGKDQ16760 1214 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 BRDTQ58F21 947 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 FAM109BQ6ICB4 259 aaPredicted RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 LRSAM1Q6UWE0 723 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 TRIM50Q86XT4 487 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 TDHQ8IZJ6 230 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 DDX12PQ92771 950 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 CCDC47Q96A33 483 aaKnown RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 FAM167AQ96KS9 214 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 CCDC43Q96MW1 224 aaKnown RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 FUCA2Q9BTY2 467 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 NIFKQ9BYG3 293 aaKnown RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 UPF3AQ9H1J1 476 aaKnown RBP15.69■□□□□ 0.1
CACNB3-216ENST00000550391 NRBP2Q9NSY0 501 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 RMND1Q9NWS8 449 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 KCND2Q9NZV8 630 aa15.69■□□□□ 0.1
CACNB3-216ENST00000550391 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 KLRC4O43908 158 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 RPN1P04843 607 aaKnown RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 RARBP10826 455 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 CPT1AP50416 773 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 NPEPPSP55786 919 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 IRX5P78411 483 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 TYRO3Q06418 890 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 PLCB4Q15147 1175 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 TRMT1LQ7Z2T5 733 aaKnown RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 U2AF1L4Q8WU68 220 aaKnown RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 DNAJC19Q96DA6 116 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 ERAP1Q9NZ08 941 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
CACNB3-216ENST00000550391 MAN1B1Q9UKM7 699 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 SYNRGQ9UMZ2 1314 aa15.68■□□□□ 0.1
CACNB3-216ENST00000550391 MUC3AQ02505 3323 aa15.67■□□□□ 0.1
CACNB3-216ENST00000550391 BIN1O00499 593 aa15.67■□□□□ 0.1
CACNB3-216ENST00000550391 SGPL1O95470 568 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms