RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 MYOGP15173 224 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SYT1P21579 422 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SFNP31947 248 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SLC26A2P50443 739 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 DEFB103AP81534 67 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 RESTQ13127 1097 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 LPIN1Q14693 890 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 ECM1Q16610 540 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 FAM26DQ5JW98 314 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 SPRED2Q7Z698 418 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 TMEM40Q8WWA1 233 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
RAB5B-208ENST00000550283 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 EIF2AK1Q9BQI3 630 aaKnown RBP12.61□□□□□ -0.39
RAB5B-208ENST00000550283 AGO3Q9H9G7 860 aaKnown RBP12.61□□□□□ -0.39
RAB5B-208ENST00000550283 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
RAB5B-208ENST00000550283 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 PCDHA2Q9Y5H9 948 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
RAB5B-208ENST00000550283 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 RRN3P2A6NIE6 340 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 H3BQV1 296 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 MED24O75448 989 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 VTNP04004 478 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 GHRP10912 638 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 GNAT1P11488 350 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 ANP32AP39687 249 aaKnown RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 TECP42680 631 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 RABGGTBP53611 331 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 PTGDRQ13258 359 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 GNL2Q13823 731 aaKnown RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 PKP1Q13835 747 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 EPHA7Q15375 998 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 MTERF2Q49AM1 385 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 ZNF484Q5JVG2 852 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 DBF4BQ8NFT6 615 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 LXNQ9BS40 222 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 PCDHA12Q9UN75 941 aa12.6□□□□□ -0.39
RAB5B-208ENST00000550283 YBX2Q9Y2T7 364 aaKnown RBP12.6□□□□□ -0.39
RAB5B-208ENST00000550283 COL1A2P08123 1366 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 CDH23Q9H251 3354 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 SMIM35A0A1B0GVV1 85 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 DDX11L8A8MPP1 907 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 CDC25AP30304 524 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 QARSP47897 775 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 PSMC5P62195 406 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 MRPS6P82932 125 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 GRIN1Q05586 938 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 FBXO47Q5MNV8 452 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 PSRC1Q6PGN9 363 aaPredicted RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 SLFN12Q8IYM2 578 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 CCDC155Q8N6L0 562 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 NAP1L4Q99733 375 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 TCEAL9Q9UHQ7 104 aa12.59□□□□□ -0.39
RAB5B-208ENST00000550283 MYH9P35579 1960 aaKnown RBP12.59□□□□□ -0.39
RAB5B-208ENST00000550283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 MARCH6O60337 910 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 GPR32O75388 356 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 BAG4O95429 457 aaKnown RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 CD52P31358 61 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 RFC2P35250 354 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 TRAPPC10P48553 1259 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 KIZQ2M2Z5 673 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 TMEM266Q2M3C6 531 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 XKR3Q5GH77 459 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 EFCAB12Q6NXP0 572 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 TAF2Q6P1X5 1199 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 RTN4RL1Q86UN2 441 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 KSR1Q8IVT5 923 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 TPH2Q8IWU9 490 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 PIGOQ8TEQ8 1089 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 LRRC15Q8TF66 581 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 CHAMP1Q96JM3 812 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 COL25A1Q9BXS0 654 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 TTYH1Q9H313 450 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-208ENST00000550283 ADAMTS10Q9H324 1103 aa12.58□□□□□ -0.4
RAB5B-208ENST00000550283 KAT6AQ92794 2004 aa12.57□□□□□ -0.4
RAB5B-208ENST00000550283 EVPLQ92817 2033 aa12.57□□□□□ -0.4
RAB5B-208ENST00000550283 GBF1Q92538 1859 aa12.57□□□□□ -0.4
RAB5B-208ENST00000550283 IGKV6-21A0A0C4DH24 114 aa12.57□□□□□ -0.4
RAB5B-208ENST00000550283 MGEA5O60502 916 aa12.57□□□□□ -0.4
RAB5B-208ENST00000550283 CSDE1O75534 798 aaKnown RBP12.57□□□□□ -0.4
RAB5B-208ENST00000550283 P4HBP07237 508 aaKnown RBP12.57□□□□□ -0.4
RAB5B-208ENST00000550283 ATP2C1P98194 919 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms