RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ADCK5Q3MIX3 580 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 NAALADL2Q58DX5 795 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 FAM102BQ5T8I3 360 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 AZI2Q9H6S1 392 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
SMARCD1-208ENST00000550280 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 PER2O15055 1255 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 EDIL3O43854 480 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 PPFIA3O75145 1194 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 NAPAP54920 295 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 ERVFC1P60507 584 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 KCNC3Q14003 757 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 CBX2Q14781 532 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 FAM228AQ86W67 206 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 PRSS33Q8NF86 280 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 EDAQ92838 391 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 ADAM2Q99965 735 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 SDF4Q9BRK5 362 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 CWH43Q9H720 699 aa13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
SMARCD1-208ENST00000550280 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 M0QZ92 97 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 FSCN2O14926 492 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 C22orf31O95567 290 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 FGFR1P11362 822 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 ADCY7P51828 1080 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 DSC3Q14574 896 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 IER5LQ5T953 404 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 NME8Q8N427 588 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 SUSD6Q92537 303 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 ANO2Q9NQ90 1003 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 BARHL2Q9NY43 387 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 ST3GAL5Q9UNP4 418 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
SMARCD1-208ENST00000550280 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 HBP1O60381 514 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 GPR32O75388 356 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 FGF18O76093 207 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 FOSP01100 380 aaPredicted RBP13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 SLC26A2P50443 739 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 FAM189BP81408 668 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 AP3B2Q13367 1082 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 RTN1Q16799 776 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 NIPA1Q7RTP0 329 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 LINC01465Q8N7H1 131 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 OSMRQ99650 979 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 MAFBQ9Y5Q3 323 aaPredicted RBP13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 FNDC1Q4ZHG4 1894 aaPredicted RBP13.18□□□□□ -0.3
SMARCD1-208ENST00000550280 BACH1O14867 736 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 VTNP04004 478 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 CYP3A4P08684 503 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 PKN1Q16512 942 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 DUSP6Q16828 381 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 LENG9Q96B70 501 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 ZNF302Q9NR11 478 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 COL1A2P08123 1366 aa13.17□□□□□ -0.3
SMARCD1-208ENST00000550280 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 TMEM221A6NGB7 291 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 GOLGA8AA7E2F4 631 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 M0R296 226 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ZBTB43O43298 467 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 CPA1P15085 419 aa13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 ADD1P35611 737 aaKnown RBP13.16□□□□□ -0.3
SMARCD1-208ENST00000550280 PBX3P40426 434 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms