RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 TMOD1P28289 359 aa29.1■■■□□ 2.25
CPSF6-205ENST00000550075 TBC1D8BQ0IIM8 1120 aa29.1■■■□□ 2.25
CPSF6-205ENST00000550075 MAP7D2Q96T17 732 aa29.1■■■□□ 2.25
CPSF6-205ENST00000550075 TRPV2Q9Y5S1 764 aa29.1■■■□□ 2.25
CPSF6-205ENST00000550075 EVPLQ92817 2033 aa29.1■■■□□ 2.25
CPSF6-205ENST00000550075 ABHD14A-ACY1A0A1B0GW23 586 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 VPS37CA5D8V6 355 aaPredicted RBP29.09■■■□□ 2.25
CPSF6-205ENST00000550075 DDX11L8A8MPP1 907 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 MGAT3Q09327 533 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 IKBKEQ14164 716 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 METTL13Q8N6R0 699 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 APBB2Q92870 758 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 SLC9A7Q96T83 725 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 NIFKQ9BYG3 293 aaKnown RBP29.09■■■□□ 2.25
CPSF6-205ENST00000550075 ZSWIM4Q9H7M6 989 aa29.09■■■□□ 2.25
CPSF6-205ENST00000550075 SIP14410 1827 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 LAD1O00515 517 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 CHRNA1P02708 482 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 MTERF2Q49AM1 385 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 PLEKHG4Q58EX7 1191 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 C4orf19Q8IY42 314 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 DYDC2Q96IM9 177 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 EIF2AK1Q9BQI3 630 aaKnown RBP29.08■■■□□ 2.25
CPSF6-205ENST00000550075 JPH2Q9BR39 696 aaPredicted RBP29.08■■■□□ 2.25
CPSF6-205ENST00000550075 PPME1Q9Y570 386 aa29.08■■■□□ 2.25
CPSF6-205ENST00000550075 HSP90AA1P07900 732 aaKnown RBP29.07■■■□□ 2.24
CPSF6-205ENST00000550075 ATP2A2P16615 1042 aaKnown RBP29.07■■■□□ 2.24
CPSF6-205ENST00000550075 CYP4A11Q02928 519 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 NBR1Q14596 966 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 BRAPQ7Z569 592 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 ZNF710Q8N1W2 664 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 USP38Q8NB14 1042 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 DBF4BQ8NFT6 615 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 ERMNQ8TAM6 284 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 IFIH1Q9BYX4 1025 aaKnown RBP29.07■■■□□ 2.24
CPSF6-205ENST00000550075 SQORQ9Y6N5 450 aa29.07■■■□□ 2.24
CPSF6-205ENST00000550075 KDM3AQ9Y4C1 1321 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 GHRP10912 638 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 TOB1P50616 345 aaPredicted RBP29.06■■■□□ 2.24
CPSF6-205ENST00000550075 TARBP2Q15633 366 aaKnown RBP29.06■■■□□ 2.24
CPSF6-205ENST00000550075 RAB30Q15771 203 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 OTUD6AQ7L8S5 288 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 KIAA0319LQ8IZA0 1049 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 PHOSPHO2Q8TCD6 241 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 CELF4Q9BZC1 486 aaKnown RBP29.06■■■□□ 2.24
CPSF6-205ENST00000550075 RAB34Q9BZG1 259 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 RGL1Q9NZL6 768 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 PCDHB6Q9Y5E3 794 aa29.06■■■□□ 2.24
CPSF6-205ENST00000550075 MICAL3Q7RTP6 2002 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 POTEMA6NI47 508 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 TMEM62Q0P6H9 643 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 FBXO47Q5MNV8 452 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 EFCAB12Q6NXP0 572 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 TSHZ1Q6ZSZ6 1077 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 ANO5Q75V66 913 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 TPH2Q8IWU9 490 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 EXOC8Q8IYI6 725 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 CCDC43Q96MW1 224 aaKnown RBP29.05■■■□□ 2.24
CPSF6-205ENST00000550075 AKT3Q9Y243 479 aa29.05■■■□□ 2.24
CPSF6-205ENST00000550075 STBD1O95210 358 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 YWHABP31946 246 aaKnown RBP29.04■■■□□ 2.24
CPSF6-205ENST00000550075 CLCN3P51790 818 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 WDR5P61964 334 aaKnown RBP29.04■■■□□ 2.24
CPSF6-205ENST00000550075 PTGDRQ13258 359 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 CTTNQ14247 550 aaKnown RBP29.04■■■□□ 2.24
CPSF6-205ENST00000550075 LPIN1Q14693 890 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 FAM109BQ6ICB4 259 aaPredicted RBP29.04■■■□□ 2.24
CPSF6-205ENST00000550075 CYP26B1Q9NR63 512 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.04■■■□□ 2.24
CPSF6-205ENST00000550075 FOXD4L1Q9NU39 408 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 MSRAQ9UJ68 235 aa29.04■■■□□ 2.24
CPSF6-205ENST00000550075 TMEM265A0A087WTH1 108 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 LYPLA2O95372 231 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 DNAJB2P25686 324 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 TECP42680 631 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 DNM2P50570 870 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 FXR2P51116 673 aaKnown RBP eCLIP29.03■■■□□ 2.24
CPSF6-205ENST00000550075 ZNF697Q5TEC3 545 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 HAUS3Q68CZ6 603 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 PLA2G4FQ68DD2 849 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 LRRC71Q8N4P6 559 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 LINC01465Q8N7H1 131 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 CEP170P1Q96L14 293 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 HSD17B14Q9BPX1 270 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 SUGCTQ9HAC7 445 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 STK24Q9Y6E0 443 aa29.03■■■□□ 2.24
CPSF6-205ENST00000550075 ARID2Q68CP9 1835 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 TMEM150BA6NC51 233 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 SLITRK3O94933 977 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 SYT1P21579 422 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 PRPHP41219 470 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 ODR4Q5SWX8 454 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 SLC7A3Q8WY07 619 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 TUFT1Q9NNX1 390 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 WRAP73Q9P2S5 460 aaPredicted RBP29.02■■■□□ 2.24
CPSF6-205ENST00000550075 GINS2Q9Y248 185 aa29.02■■■□□ 2.24
CPSF6-205ENST00000550075 AMHP03971 560 aa29.01■■■□□ 2.23
CPSF6-205ENST00000550075 VTNP04004 478 aa29.01■■■□□ 2.23
CPSF6-205ENST00000550075 RFC5P40937 340 aa29.01■■■□□ 2.23
CPSF6-205ENST00000550075 POLGP54098 1239 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms