RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 CYP2W1Q8TAV3 490 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PBXIP1Q96AQ6 731 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 CDCA3Q99618 268 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 SDF4Q9BRK5 362 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PHF7Q9BWX1 381 aaPredicted RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 TLE6Q9H808 572 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 ERVK-5Q9HDB9 667 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 AAASQ9NRG9 546 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PKD2L1Q9P0L9 805 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 LRFN2Q9ULH4 789 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PCDHB7Q9Y5E2 793 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 PCDHB12Q9Y5F1 795 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 EVPLQ92817 2033 aa11.26□□□□□ -0.61
TRAFD1-207ENST00000550051 HBP1O60381 514 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 ARP10275 920 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 KLRC1P26715 233 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM62Q0P6H9 643 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 KCNC3Q14003 757 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 PAN2Q504Q3 1202 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 IER5LQ5T953 404 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 SLC24A5Q71RS6 500 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 RBM23Q86U06 439 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 KIAA0319LQ8IZA0 1049 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 TRAPPC12Q8WVT3 735 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 SUSD6Q92537 303 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 AGO4Q9HCK5 861 aaKnown RBP11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 USP15Q9Y4E8 981 aaPredicted RBP11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 SLC12A7Q9Y666 1083 aa11.25□□□□□ -0.61
TRAFD1-207ENST00000550051 hCG_1642624A0A1W2PR95 340 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 C9IYK1 514 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 GPR182O15218 404 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 MGEA5O60502 916 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 GATMP50440 423 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 PTPN5P54829 565 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 ERVFC1P60507 584 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 DUSP6Q16828 381 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 ZNF484Q5JVG2 852 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 ABHD15Q6UXT9 468 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 SGMS1Q86VZ5 419 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 FBXL6Q8N531 539 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 PRSS33Q8NF86 280 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 MICAL1Q8TDZ2 1067 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 ADAM2Q99965 735 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 S1PR5Q9H228 398 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 BARX2Q9UMQ3 279 aaPredicted RBP11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 LZTS1Q9Y250 596 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 NOC2LQ9Y3T9 749 aaKnown RBP11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 COL1A2P08123 1366 aa11.24□□□□□ -0.61
TRAFD1-207ENST00000550051 FSCN2O14926 492 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 PER2O15055 1255 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 FGF18O76093 207 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 CSPG5O95196 566 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 RXRAP19793 462 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 CRYBB1P53674 252 aaPredicted RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 PLCB3Q01970 1234 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 SIGLEC14Q08ET2 396 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 NECTIN1Q15223 517 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM266Q2M3C6 531 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 SUGP1Q8IWZ8 645 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 VN1R2Q8NFZ6 395 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 ELAC1Q9H777 363 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 ST3GAL5Q9UNP4 418 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 PCDHGC5Q9Y5F6 944 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
TRAFD1-207ENST00000550051 DENND3A2RUS2 1198 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 ZBTB42B2RXF5 422 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 SLC27A2O14975 620 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 DHX15O43143 795 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 CCNE2O96020 404 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 SREBF1P36956 1147 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 CLK2P49760 499 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 FUT2Q10981 343 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms