RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 CHMP4BP1P59074 171 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-208ENST00000549995 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-208ENST00000549995 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 HYIQ5T013 277 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 PSRC1Q6PGN9 363 aaPredicted RBP13.35□□□□□ -0.27
PFDN5-208ENST00000549995 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 ZNF710Q8N1W2 664 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 NME8Q8N427 588 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 DYDC2Q96IM9 177 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 ANKEF1Q9NU02 776 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
PFDN5-208ENST00000549995 COL4A6Q14031 1691 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 GBF1Q92538 1859 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 MAFO75444 373 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-208ENST00000549995 MED24O75448 989 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 BRD1O95696 1058 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 F13A1P00488 732 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 TECP42680 631 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-208ENST00000549995 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 HAUS3Q68CZ6 603 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 CATSPER3Q86XQ3 398 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 TDHQ8IZJ6 230 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 RETREG2Q8NC44 543 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 AK8Q96MA6 479 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
PFDN5-208ENST00000549995 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-208ENST00000549995 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
PFDN5-208ENST00000549995 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 NBNO60934 754 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 RSPH10BP0C881 870 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 KLRC1P26715 233 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 YWHABP31946 246 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 CCL23P55773 120 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 PKP1Q13835 747 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 DTHD1Q6ZMT9 781 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 RPUSD2Q8IZ73 545 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 KIAA0319LQ8IZA0 1049 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 ERMNQ8TAM6 284 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 HERVK_113Q902F9 699 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 SCLYQ96I15 445 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 MMTAG2Q9BU76 263 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 CYP26B1Q9NR63 512 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
PFDN5-208ENST00000549995 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
PFDN5-208ENST00000549995 LAMA3Q16787 3333 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 BAIAP3O94812 1187 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 CHRNA1P02708 482 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 THPOP40225 353 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 RFC5P40937 340 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 IGBP1P78318 339 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 MRPS6P82932 125 aaKnown RBP13.32□□□□□ -0.28
PFDN5-208ENST00000549995 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
PFDN5-208ENST00000549995 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 PLEKHG4Q58EX7 1191 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 OTUD6AQ7L8S5 288 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 DNAJB3Q8WWF6 145 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-208ENST00000549995 UBE2OQ9C0C9 1292 aaKnown RBP13.32□□□□□ -0.28
PFDN5-208ENST00000549995 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 CLIC4Q9Y696 253 aa13.32□□□□□ -0.28
PFDN5-208ENST00000549995 TCHHQ07283 1943 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 TMEM150BA6NC51 233 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 GPR32O75388 356 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 YEATS4O95619 227 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
PFDN5-208ENST00000549995 RARRES1P49788 294 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 ECM1Q16610 540 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 FBXO47Q5MNV8 452 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 C9orf50Q5SZB4 431 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 IER5Q5VY09 327 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 CNKSR3Q6P9H4 555 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 USP38Q8NB14 1042 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 NACC1Q96RE7 527 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
PFDN5-208ENST00000549995 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-208ENST00000549995 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
PFDN5-208ENST00000549995 TRPV2Q9Y5S1 764 aa13.31□□□□□ -0.28
PFDN5-208ENST00000549995 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
PFDN5-208ENST00000549995 PPP6R2O75170 966 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms