RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 HSP90AA2PQ14568 343 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 KRT31Q15323 416 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 TAF1CQ15572 869 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 KNOP1Q1ED39 458 aaKnown RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 GPR142Q7Z601 462 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 FILIP1Q7Z7B0 1213 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 FAM178BQ8IXR5 827 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 ZC3H3Q8IXZ2 948 aaKnown RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 FGD4Q96M96 766 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 PTPN18Q99952 460 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 AZI2Q9H6S1 392 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 MLXIPQ9HAP2 919 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 ZFYVE28Q9HCC9 887 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 TYW1Q9NV66 732 aaKnown RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 DDX41Q9UJV9 622 aaKnown RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
CACNB3-212ENST00000549971 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
CACNB3-212ENST00000549971 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 RBM47A0AV96 593 aaKnown RBP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 CETN3O15182 167 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 HIP1RO75146 1068 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 PGK2P07205 417 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 PLS3P13797 630 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 SFPQP23246 707 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 RFC5P40937 340 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 DNM2P50570 870 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 SMTNP53814 917 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 APTXQ7Z2E3 356 aaKnown RBP13.87□□□□□ -0.19
CACNB3-212ENST00000549971 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 DPP9Q86TI2 863 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 KCNN1Q92952 543 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 EMSYQ7Z589 1322 aa13.87□□□□□ -0.19
CACNB3-212ENST00000549971 TMEM88BA6NKF7 163 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 NOP56O00567 594 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 SLC16A3O15427 465 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 TLR2O60603 784 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 PEX10O60683 326 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 GCNT3O95395 438 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 GGPS1O95749 300 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 OATP04181 439 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 HOXC6P09630 235 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 PMS1P54277 932 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 PRKCEQ02156 737 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 FSTL1Q12841 308 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 FKBP15Q5T1M5 1219 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 ZNF720Q7Z2F6 126 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 RETREG2Q8NC44 543 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 EMID1Q96A84 441 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 CCDC51Q96ER9 411 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 NAP1L5Q96NT1 182 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 NUP58Q9BVL2 599 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 METTL14Q9HCE5 456 aaKnown RBP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 EXOC7Q9UPT5 735 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNB3-212ENST00000549971 PHLPP2Q6ZVD8 1323 aa13.86□□□□□ -0.19
CACNB3-212ENST00000549971 USO1O60763 962 aaKnown RBP13.85□□□□□ -0.19
CACNB3-212ENST00000549971 LGR5O75473 907 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 PTGS1P23219 599 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 PBX1P40424 430 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 KCNJ6P48051 423 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 TM4SF4P48230 202 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 STAT5BP51692 787 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 SP2Q02086 613 aa13.85□□□□□ -0.19
CACNB3-212ENST00000549971 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms