RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 DYMQ7RTS9 669 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SGMS1Q86VZ5 419 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 NOSTRINQ8IVI9 506 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SULF2Q8IWU5 870 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 CCDC170Q8IYT3 715 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 MMGT1Q8N4V1 131 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 NOA1Q8NC60 698 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SHKBP1Q8TBC3 707 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 MAGEC3Q8TD91 643 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 AENQ8WTP8 325 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.22□□□□□ -1.735e-8■■■■■ 65.3
RAB5B-207ENST00000549915 CAVIN3Q969G5 261 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 FERMT2Q96AC1 680 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 EDC3Q96F86 508 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 RHOXF2Q9BQY4 288 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SELENOOQ9BVL4 669 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 TSGA10Q9BZW7 698 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 FOXP1Q9H334 677 aaPredicted RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 C12orf49Q9H741 205 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 ACTR5Q9H9F9 607 aaPredicted RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 GNL3LQ9NVN8 582 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 RMND1Q9NWS8 449 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 AATFQ9NY61 560 aaKnown RBP eCLIP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 FBXO2Q9UK22 296 aaPredicted RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 TBX22Q9Y458 520 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SRPRBQ9Y5M8 271 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 SAR1BQ9Y6B6 198 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 ECM29Q5VYK3 1845 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 PXDNQ92626 1479 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 C5P01031 1676 aa4.22□□□□□ -1.73
RAB5B-207ENST00000549915 MYO5AQ9Y4I1 1855 aaKnown RBP4.22□□□□□ -1.73
RAB5B-207ENST00000549915 GRIN2DO15399 1336 aa4.21□□□□□ -1.73
RAB5B-207ENST00000549915 AFDNP55196 1824 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GOLGA6L7A0A1B0GV03 622 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 H0YHG0 523 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ZNF213O14771 459 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MEFVO15553 781 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ZBTB43O43298 467 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 NDUFA10O95299 355 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MMP1P03956 469 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ANXA1P04083 346 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 APPP05067 770 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 IFIT1P09914 478 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 IFNAR1P17181 557 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 TCP1P17987 556 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GPTP24298 496 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ARNTP27540 789 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GNA15P30679 374 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 HOXA7P31268 230 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CASP14P31944 242 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 PPP1R2P41236 205 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 IARSP41252 1262 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 LIFRP42702 1097 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CCT5P48643 541 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 FNTAP49354 379 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 LIG3P49916 1009 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ANTXR2P58335 489 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CDK17Q00537 523 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 SATB1Q01826 763 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 AKAP17AQ02040 695 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GOLGA8FQ08AF8 430 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GOLGA8DPQ0D2H9 430 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 IFFO1Q0D2I5 559 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MTF1Q14872 753 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 PPP2R5BQ15173 497 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MEA1Q16626 185 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 PROSER3Q2NL68 480 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CYP27C1Q4G0S4 372 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 PREPLQ4J6C6 727 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GLE1Q53GS7 698 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 KCNV1Q6PIU1 500 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 TMED8Q6PL24 325 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 APOA5Q6Q788 366 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CCNI2Q6ZMN8 369 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 KDM7AQ6ZMT4 941 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ARMC9Q7Z3E5 817 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ZAR1Q86SH2 424 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CERS3Q8IU89 383 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 FOXP4Q8IVH2 680 aaPredicted RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 CD302Q8IX05 232 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MREGQ8N565 214 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ARFGAP2Q8N6H7 521 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 OTUD6BQ8N6M0 293 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 GPATCH11Q8N954 259 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 EIF1ADQ8N9N8 165 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 KCT2Q8NC54 265 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 OR8K1Q8NGG5 319 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 BCAS4Q8TDM0 211 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 NOC3LQ8WTT2 800 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 SECISBP2LQ93073 1101 aaKnown RBP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 RUFY1Q96T51 708 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 DNAJC7Q99615 494 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 MYD88Q99836 296 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 WDR18Q9BV38 432 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 NUP58Q9BVL2 599 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.21□□□□□ -1.74
RAB5B-207ENST00000549915 ACSS3Q9H6R3 686 aa4.21□□□□□ -1.74
RAB5B-207ENST00000549915 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms