RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 RHOBTB3O94955 611 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 CNGA1P29973 690 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 GJA9P57773 515 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 PSMD2Q13200 908 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 MORC3Q14149 939 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 ARSHQ5FYA8 562 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 CT47A1Q5JQC4 288 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-220ENST00000549686 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.68
LETMD1-220ENST00000549686 DNAJC19Q96DA6 116 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 CEP170P1Q96L14 293 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 NAT10Q9H0A0 1025 aaKnown RBP19.33■□□□□ 0.68
LETMD1-220ENST00000549686 CYP26B1Q9NR63 512 aa19.33■□□□□ 0.68
LETMD1-220ENST00000549686 A0A087WWV3 80 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 FRMD3A2A2Y4 597 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 ZBTB39O15060 712 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 KLRC4O43908 158 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 HBP1O60381 514 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 TBCAO75347 108 aaKnown RBP19.32■□□□□ 0.68
LETMD1-220ENST00000549686 GAP43P17677 238 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 ATP4AP20648 1035 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 RFC5P40937 340 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 PPP1R2P41236 205 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 DYMQ7RTS9 669 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 MLKLQ8NB16 471 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 MCPH1Q8NEM0 835 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 JPH2Q9BR39 696 aaPredicted RBP19.32■□□□□ 0.68
LETMD1-220ENST00000549686 RUSC1Q9BVN2 902 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 PTPN22Q9Y2R2 807 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 COL4A3BPQ9Y5P4 624 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
LETMD1-220ENST00000549686 INHAP05111 366 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 IDEP14735 1019 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 CASP1P29466 404 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 TRIM32Q13049 653 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 GIT2Q14161 759 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 PLCB4Q15147 1175 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 FSCN1Q16658 493 aaKnown RBP19.31■□□□□ 0.68
LETMD1-220ENST00000549686 KMT5BQ4FZB7 885 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 ZNF658Q5TYW1 1059 aaPredicted RBP19.31■□□□□ 0.68
LETMD1-220ENST00000549686 REEP2Q9BRK0 252 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 C16orf70Q9BSU1 422 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 KATNAL1Q9BW62 490 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 HMX1Q9NP08 348 aaPredicted RBP19.31■□□□□ 0.68
LETMD1-220ENST00000549686 PANK4Q9NVE7 773 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 SEL1LQ9UBV2 794 aa19.31■□□□□ 0.68
LETMD1-220ENST00000549686 DDX20Q9UHI6 824 aaKnown RBP19.31■□□□□ 0.68
LETMD1-220ENST00000549686 LOXHD1Q8IVV2 1947 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 H3BRB1 525 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 BIN1O00499 593 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 GAS2O43903 313 aaKnown RBP19.3■□□□□ 0.68
LETMD1-220ENST00000549686 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
LETMD1-220ENST00000549686 TARBP2Q15633 366 aaKnown RBP19.3■□□□□ 0.68
LETMD1-220ENST00000549686 ZNF484Q5JVG2 852 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 PLA2G4FQ68DD2 849 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 DRC1Q96MC2 740 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 TUT1Q9H6E5 874 aaKnown RBP19.3■□□□□ 0.68
LETMD1-220ENST00000549686 ATP6V0A4Q9HBG4 840 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 KCNG1Q9UIX4 513 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 TRPC6Q9Y210 931 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 COL1A2P08123 1366 aa19.3■□□□□ 0.68
LETMD1-220ENST00000549686 SYNRGQ9UMZ2 1314 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 USO1O60763 962 aaKnown RBP19.29■□□□□ 0.68
LETMD1-220ENST00000549686 FAM13AO94988 1023 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 F2P00734 622 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 HSPA8P11142 646 aaKnown RBP19.29■□□□□ 0.68
LETMD1-220ENST00000549686 PTGS1P23219 599 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 CST5P28325 142 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-220ENST00000549686 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
LETMD1-220ENST00000549686 NPEPPSP55786 919 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 MTERF2Q49AM1 385 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 SLC7A3Q8WY07 619 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 KIFAP3Q92845 792 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 C17orf75Q9HAS0 396 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 XPNPEP3Q9NQH7 507 aa19.29■□□□□ 0.68
LETMD1-220ENST00000549686 KIF20AO95235 890 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 C6orf222P0C671 652 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 MARK3P27448 753 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 ZNF131P52739 623 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 POLGP54098 1239 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 EHHADHQ08426 723 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 COASYQ13057 564 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 STIM1Q13586 685 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 PKN2Q16513 984 aaKnown RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 COBLL1Q53SF7 1204 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 HERC4Q5GLZ8 1057 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 CTU1Q7Z7A3 348 aaKnown RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 SLC17A8Q8NDX2 589 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 LENG1Q96BZ8 264 aaPredicted RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 DHX33Q9H6R0 707 aaKnown RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 PDLIM7Q9NR12 457 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 LARSQ9P2J5 1176 aaKnown RBP19.28■□□□□ 0.68
LETMD1-220ENST00000549686 DOCK5Q9H7D0 1870 aa19.28■□□□□ 0.68
LETMD1-220ENST00000549686 NPHP3-ACAD11A0A0J9YXS1 232 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 TMEM150BA6NC51 233 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 ADAMTS4O75173 837 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 MAFO75444 373 aaPredicted RBP19.27■□□□□ 0.68
LETMD1-220ENST00000549686 ZNF286BP0CG31 522 aa19.27■□□□□ 0.68
LETMD1-220ENST00000549686 RTP1P59025 263 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms