RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 RANBP17Q9H2T7 1088 aaKnown RBP12.38□□□□□ -0.43
TROAP-210ENST00000549534 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 CWH43Q9H720 699 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 MIA3Q5JRA6 1907 aa12.38□□□□□ -0.43
TROAP-210ENST00000549534 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 GIPC1O14908 333 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
TROAP-210ENST00000549534 PDE6AP16499 860 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 SARSP49591 514 aaKnown RBP12.37□□□□□ -0.43
TROAP-210ENST00000549534 SNAP25P60880 206 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 SRSF1Q07955 248 aaKnown RBP eCLIP12.37□□□□□ -0.43
TROAP-210ENST00000549534 SNW1Q13573 536 aaKnown RBP12.37□□□□□ -0.43
TROAP-210ENST00000549534 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 RCSD1Q6JBY9 416 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
TROAP-210ENST00000549534 CEP95Q96GE4 821 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 LOXL4Q96JB6 756 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 SPATA33Q96N06 139 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 WDR6Q9NNW5 1121 aaKnown RBP12.37□□□□□ -0.43
TROAP-210ENST00000549534 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
TROAP-210ENST00000549534 AKAP13Q12802 2813 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 PRKAB2O43741 272 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 C1QL1O75973 258 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
TROAP-210ENST00000549534 PFKPQ01813 784 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 MTAPQ13126 283 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 HSDL1Q3SXM5 330 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 RNF43Q68DV7 783 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 KCNV1Q6PIU1 500 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 KCNT2Q6UVM3 1135 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
TROAP-210ENST00000549534 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 ARMT1Q9H993 441 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 AGO3Q9H9G7 860 aaKnown RBP12.36□□□□□ -0.43
TROAP-210ENST00000549534 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
TROAP-210ENST00000549534 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
TROAP-210ENST00000549534 FAM221BA6H8Z2 402 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 HRO43593 1189 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 EIF3JO75822 258 aaKnown RBP12.35□□□□□ -0.43
TROAP-210ENST00000549534 SEC24BO95487 1268 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 CXCL14O95715 111 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 PDE4AP27815 886 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 CD52P31358 61 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 CCR3P51677 355 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 GPC5P78333 572 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 HTR4Q13639 388 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 SH3PXD2AQ5TCZ1 1133 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 FAM160A2Q8N612 972 aaPredicted RBP12.35□□□□□ -0.43
TROAP-210ENST00000549534 LSM14AQ8ND56 463 aaKnown RBP12.35□□□□□ -0.43
TROAP-210ENST00000549534 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
TROAP-210ENST00000549534 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 LRIG1Q96JA1 1093 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 ZNF287Q9HBT7 754 aa12.35□□□□□ -0.43
TROAP-210ENST00000549534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.43
TROAP-210ENST00000549534 MRPS17Q9Y2R5 130 aaKnown RBP12.35□□□□□ -0.43
TROAP-210ENST00000549534 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 PRB1P04280 392 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 LAMP2P13473 410 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 MCCP23508 829 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 ARHGAP4P98171 946 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 AAMPQ13685 434 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 CELF3Q5SZQ8 465 aaKnown RBP12.34□□□□□ -0.43
TROAP-210ENST00000549534 FAM217BQ9NTX9 383 aaPredicted RBP12.34□□□□□ -0.43
TROAP-210ENST00000549534 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
TROAP-210ENST00000549534 CLUHO75153 1309 aa12.34□□□□□ -0.43
TROAP-210ENST00000549534 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 HYAL3O43820 417 aaPredicted RBP12.33□□□□□ -0.44
TROAP-210ENST00000549534 KRT38O76015 456 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 LGALS2P05162 132 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
TROAP-210ENST00000549534 CA8P35219 290 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 ADCY1Q08828 1119 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 PPP4R3BQ5MIZ7 849 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
TROAP-210ENST00000549534 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 CHRDQ9H2X0 955 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 PADI3Q9ULW8 664 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 PCDHGA5Q9Y5G8 931 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 CDY2AQ9Y6F7 541 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 ZFP37Q9Y6Q3 630 aaPredicted RBP12.33□□□□□ -0.44
TROAP-210ENST00000549534 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
TROAP-210ENST00000549534 RALGAPA1Q6GYQ0 2036 aa12.32□□□□□ -0.44
TROAP-210ENST00000549534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms