RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 ARID3AQ99856 593 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 POLR3CQ9BUI4 534 aaPredicted RBP12.71□□□□□ -0.37
VDR-206ENST00000549336 CTDNEP1O95476 244 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 ZBTB48P10074 688 aaPredicted RBP12.71□□□□□ -0.37
VDR-206ENST00000549336 AMIGO3Q86WK7 504 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 THNSL1Q8IYQ7 743 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 ZKSCAN5Q9Y2L8 839 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
VDR-206ENST00000549336 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 ATP2A1O14983 1001 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 SLC16A4O15374 487 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 CTAGE8P0CG41 777 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 AP3M2P53677 418 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 KCNB1Q14721 858 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.38
VDR-206ENST00000549336 DPCR1Q3MIW9 517 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.38
VDR-206ENST00000549336 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 SUCLA2Q9P2R7 463 aaPredicted RBP12.71□□□□□ -0.38
VDR-206ENST00000549336 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 BEST2Q8NFU1 509 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 PXMP2Q9NR77 195 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 RGL1Q9NZL6 768 aa12.71□□□□□ -0.38
VDR-206ENST00000549336 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 PLA2G6O60733 806 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
VDR-206ENST00000549336 CUL4BQ13620 913 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 ARMCX2Q7L311 632 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 NIPA1Q7RTP0 329 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 WNK4Q96J92 1243 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 C17orf75Q9HAS0 396 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 MED7O43513 233 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 PRKCEQ02156 737 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 HAUS6Q7Z4H7 955 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 CEP112Q8N8E3 955 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 MAF1Q9H063 256 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 LZTFL1Q9NQ48 299 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 CAPN9O14815 690 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 DAPK3O43293 454 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 RNF149Q8NC42 400 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 TRIM11Q96F44 468 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
VDR-206ENST00000549336 TUBB2BQ9BVA1 445 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 RGPD5Q99666 1765 aa12.7□□□□□ -0.38
VDR-206ENST00000549336 JAKMIP2Q96AA8 810 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 RANBP17Q9H2T7 1088 aaKnown RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 PPME1Q9Y570 386 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 NFIBO00712 420 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 HIP1RO75146 1068 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 TRPA1O75762 1119 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 PSMC4P43686 418 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 ACTR2P61160 394 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 OSTNP61366 133 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 DSTYKQ6XUX3 929 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 SMYD4Q8IYR2 804 aaPredicted RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 PGBD4Q96DM1 585 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 PCDHB4Q9Y5E5 795 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 PLCH1Q4KWH8 1693 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 FGRP09769 529 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 NTRK3Q16288 839 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 SND1Q7KZF4 910 aaKnown RBP eCLIP12.69□□□□□ -0.38
VDR-206ENST00000549336 MSCO60682 206 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 NR3C1P04150 777 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 SUPT20HL2P0C7V6 817 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 CYP2C9P11712 490 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 NSFP46459 744 aaKnown RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
VDR-206ENST00000549336 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 METTL7BQ6UX53 244 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 GSTA5Q7RTV2 222 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 IFT122Q9HBG6 1241 aa12.69□□□□□ -0.38
VDR-206ENST00000549336 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.69□□□□□ -0.38
VDR-206ENST00000549336 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 PGK2P07205 417 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 ELF1P32519 619 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 BBXQ8WY36 941 aaPredicted RBP12.68□□□□□ -0.38
VDR-206ENST00000549336 SECISBP2LQ93073 1101 aaKnown RBP12.68□□□□□ -0.38
VDR-206ENST00000549336 TMX1Q9H3N1 280 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 MSH4O15457 936 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 OATP04181 439 aa12.68□□□□□ -0.38
VDR-206ENST00000549336 AKR1A1P14550 325 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms