RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 JAK3P52333 1124 aa21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 RDM1Q8NG50 284 aa21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 ASB2Q96Q27 587 aa21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 PADI3Q9ULW8 664 aa21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 TTC3P53804 2025 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 MAGEB2O15479 319 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 C22orf31O95567 290 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 KRT40Q6A162 431 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 FBXO22Q8NEZ5 403 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 GDPD5Q8WTR4 605 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 WASF1Q92558 559 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 C17orf80Q9BSJ5 609 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 NRBP2Q9NSY0 501 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 KCNJ14Q9UNX9 436 aa21.06■□□□□ 0.96
CHMP1A-207ENST00000549328 CTDNEP1O95476 244 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 TDP2O95551 362 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 PAK2Q13177 524 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 ODR4Q5SWX8 454 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 B3GNT9Q6UX72 402 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 RTN4RL1Q86UN2 441 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 UNC45AQ9H3U1 944 aa21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-207ENST00000549328 CCDC194A0A1B0GVG4 234 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 ZNF862O60290 1169 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 NEK4P51957 841 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 SKIV2LQ15477 1246 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 ME3Q16798 604 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 INF2Q27J81 1249 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 AAK1Q2M2I8 961 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 EPC2Q52LR7 807 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 ZNF710Q8N1W2 664 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 ETNPPLQ8TBG4 499 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 COG5Q9UP83 839 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 TTC28Q96AY4 2481 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 EVPLQ92817 2033 aa21.04■□□□□ 0.96
CHMP1A-207ENST00000549328 OATP04181 439 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 GCFC2P16383 781 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 CRYBB1P53674 252 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 PPP4R3AQ6IN85 833 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 TRMT1LQ7Z2T5 733 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 TMEM192Q8IY95 271 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 CRIPAKQ8N1N5 446 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 FIBCD1Q8N539 461 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 METTL13Q8N6R0 699 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 LINC01599Q8WXQ3 324 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 GTF3C6Q969F1 213 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 ZNF689Q96CS4 500 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 RC3H2Q9HBD1 1191 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 DDX25Q9UHL0 483 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 WDR81Q562E7 1941 aa21.03■□□□□ 0.96
CHMP1A-207ENST00000549328 COL4A4P53420 1690 aaPredicted RBP21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 LOXHD1Q8IVV2 1947 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 H3BNC9 293 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 CHMP2AO43633 222 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 RPS6KA5O75582 802 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 DGKIO75912 1065 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 SEC24BO95487 1268 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 TMOD1P28289 359 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 PRKCEQ02156 737 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 LETM2Q2VYF4 491 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 MIER3Q7Z3K6 550 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 NEK8Q86SG6 692 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 NPAS4Q8IUM7 802 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 GJA10Q969M2 543 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 FAM20AQ96MK3 541 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 NAP1L4Q99733 375 aaKnown RBP21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 CDHR5Q9HBB8 845 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 GINS2Q9Y248 185 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 RWDD3Q9Y3V2 267 aa21.02■□□□□ 0.96
CHMP1A-207ENST00000549328 REV3LO60673 3130 aa21.02■□□□□ 0.95
CHMP1A-207ENST00000549328 ADGRA3Q8IWK6 1321 aa21.02■□□□□ 0.95
CHMP1A-207ENST00000549328 GPR182O15218 404 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 RB1P06400 928 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 STAG3L1P0CL83 205 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 FDPSP14324 419 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 NFX1Q12986 1120 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 EFCAB12Q6NXP0 572 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 LINC01465Q8N7H1 131 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 NECAB1Q8N987 351 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 CLP1Q92989 425 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 MRPL38Q96DV4 380 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 TMX1Q9H3N1 280 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 ERVK-5Q9HDB9 667 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 GJB4Q9NTQ9 266 aa21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 NOC2LQ9Y3T9 749 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-207ENST00000549328 C5orf67F2Z3F1 127 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 GPR32O75388 356 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 LARGE1O95461 756 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 GPM6BQ13491 265 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 TARBP2Q15633 366 aaKnown RBP21■□□□□ 0.95
CHMP1A-207ENST00000549328 UGCGQ16739 394 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 PTPROQ16827 1216 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 KIZQ2M2Z5 673 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 TMEM266Q2M3C6 531 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 XKR3Q5GH77 459 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 OXER1Q8TDS5 423 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 TMEM40Q8WWA1 233 aa21■□□□□ 0.95
CHMP1A-207ENST00000549328 HLA-CQ95604 372 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms