RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 P2RX5Q93086 422 aa13.39□□□□□ -0.27
PTPRR-209ENST00000549308 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
PTPRR-209ENST00000549308 GPR20Q99678 358 aa13.39□□□□□ -0.27
PTPRR-209ENST00000549308 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
PTPRR-209ENST00000549308 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
PTPRR-209ENST00000549308 SFI1A8K8P3 1242 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 KIF20AO95235 890 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
PTPRR-209ENST00000549308 CTGFP29279 349 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 ZNF75DP51815 510 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 LACTBP83111 547 aaPredicted RBP13.38□□□□□ -0.27
PTPRR-209ENST00000549308 KIF22Q14807 665 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 CCL14Q16627 93 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 HSDL1Q3SXM5 330 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 SARM1Q6SZW1 724 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 ANO5Q75V66 913 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 TRIM47Q96LD4 638 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 PCYT2Q99447 389 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 SEL1LQ9UBV2 794 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 PCDHA2Q9Y5H9 948 aa13.38□□□□□ -0.27
PTPRR-209ENST00000549308 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
PTPRR-209ENST00000549308 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
PTPRR-209ENST00000549308 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 ATP4AP20648 1035 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 MAP2K2P36507 400 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 VEGFBP49765 207 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 ARHGAP1Q07960 439 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 MTERF2Q49AM1 385 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 GJC2Q5T442 439 aaPredicted RBP13.37□□□□□ -0.27
PTPRR-209ENST00000549308 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 AFAP1L1Q8TED9 768 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 GLG1Q92896 1179 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 PPP1R9BQ96SB3 815 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 TSG101Q99816 390 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 ARHGAP39Q9C0H5 1083 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 MRPL44Q9H9J2 332 aaKnown RBP13.37□□□□□ -0.27
PTPRR-209ENST00000549308 CYP26B1Q9NR63 512 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 SAMSN1Q9NSI8 373 aaKnown RBP13.37□□□□□ -0.27
PTPRR-209ENST00000549308 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
PTPRR-209ENST00000549308 ZSWIM8A7E2V4 1837 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 NKRFO15226 690 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPRR-209ENST00000549308 LGR5O75473 907 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 GCNT3O95395 438 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 SERPINC1P01008 464 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 SMPD1P17405 629 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 ZNF131P52739 623 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
PTPRR-209ENST00000549308 FANCCQ00597 558 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 SP3Q02447 781 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 MAPK7Q13164 816 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 CCDC144BQ3MJ40 725 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 FAM102BQ5T8I3 360 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 FAM167AQ96KS9 214 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 DRC1Q96MC2 740 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 DOCK3Q8IZD9 2030 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 EMSYQ7Z589 1322 aa13.36□□□□□ -0.27
PTPRR-209ENST00000549308 TRPA1O75762 1119 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 DGAT1O75907 488 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 MYBP10242 640 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 PTGS1P23219 599 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CYP2C19P33261 490 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 HTRA3P83110 453 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 TNFAIP2Q03169 654 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 IRF5Q13568 498 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 ANKRD40Q6AI12 368 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 TTI2Q6NXR4 508 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 PLPPR4Q7Z2D5 763 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 FAM178BQ8IXR5 827 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 ATP6V0A4Q9HBG4 840 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 OLFML3Q9NRN5 406 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 IFNKQ9P0W0 207 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CBFA2T2O43439 604 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 ZNF18P17022 549 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 MARK3P27448 753 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CASP5P51878 434 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-209ENST00000549308 CDKAL1Q5VV42 579 aa13.35□□□□□ -0.27
PTPRR-209ENST00000549308 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms