RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 EMILIN3Q9NT22 766 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 DDX25Q9UHL0 483 aaKnown RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.96□□□□□ -0.01
HDAC7-228ENST00000548938 ATP8A1Q9Y2Q0 1164 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 CEP83Q9Y592 693 aa14.96□□□□□ -0.01
HDAC7-228ENST00000548938 PSEN1P49768 467 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 IFFO1Q0D2I5 559 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 SF3A3Q12874 501 aaKnown RBP eCLIP14.95□□□□□ -0.02
HDAC7-228ENST00000548938 XRCC4Q13426 336 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 RASGEF1CQ8N431 466 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 PNMA2Q9UL42 364 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 KIAA1024Q9UPX6 916 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 STXBP5LQ9Y2K9 1186 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 NR2E1Q9Y466 385 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 ATAD5Q96QE3 1844 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 POTEB3A0JP26 581 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 POTECB2RU33 542 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 CETN3O15182 167 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 BAG3O95817 575 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 PLA2G4BP0C869 781 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 MMP14P50281 582 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 CASP5P51878 434 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 POTEBQ6S5H4 581 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 C16orf86Q6ZW13 317 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 ARMC9Q7Z3E5 817 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 ZC3H3Q8IXZ2 948 aaKnown RBP14.95□□□□□ -0.02
HDAC7-228ENST00000548938 ATP8B4Q8TF62 1192 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 SEC14L1Q92503 715 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 TLCD1Q96CP7 247 aa14.95□□□□□ -0.02
HDAC7-228ENST00000548938 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
HDAC7-228ENST00000548938 DDX60LQ5H9U9 1706 aaKnown RBP14.95□□□□□ -0.02
HDAC7-228ENST00000548938 MARCH6O60337 910 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CAND2O75155 1236 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FLOT1O75955 427 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 SCP2P22307 547 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CRY2Q49AN0 593 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 SLFN11Q7Z7L1 901 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 NT5DC3Q86UY8 548 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CCDC26Q8TAB7 109 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CHMP6Q96FZ7 201 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 NENFQ9UMX5 172 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 IRS2Q9Y4H2 1338 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 PON1P27169 355 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 ERMARDQ5T6L9 678 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FMO2Q99518 471 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FAM129AQ9BZQ8 928 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 ZNF287Q9HBT7 754 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 SUCLA2Q9P2R7 463 aaPredicted RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 UTP11Q9Y3A2 253 aaKnown RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 BZW2Q9Y6E2 419 aaKnown RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FAM170AA1A519 330 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 PLSCR1O15162 318 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 APBA3O96018 575 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FGGP02679 453 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 SHBGP04278 402 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 H2AFZP0C0S5 128 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CYP11B2P19099 503 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 POU5F1Q01860 360 aaKnown RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 EXOC3L4Q17RC7 722 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 DCAF17Q5H9S7 520 aaPredicted RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 H2AFVQ71UI9 128 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 CCDC50Q8IVM0 306 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 FAM114A2Q9NRY5 505 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 ANKIB1Q9P2G1 1089 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 ARMCX3Q9UH62 379 aaPredicted RBP14.94□□□□□ -0.02
HDAC7-228ENST00000548938 PCDHA12Q9UN75 941 aa14.94□□□□□ -0.02
HDAC7-228ENST00000548938 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 DDX3XO00571 662 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 PPFIA2O75334 1257 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 AFPP02771 609 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 COPB2P35606 906 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 PRKCIP41743 596 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 PPP4CP60510 307 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 EDRF1Q3B7T1 1238 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 GJB7Q6PEY0 223 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 LRRC47Q8N1G4 583 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 RPGRQ92834 1020 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 TXLNGYQ9BZA5 131 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 CNOT10Q9H9A5 744 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 VEZTQ9HBM0 779 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 hCG_1984214I3L0E3 225 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 DNAJC8O75937 253 aaPredicted RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 KRT18P05783 430 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 HYIQ5T013 277 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 ZNF713Q8N859 430 aaPredicted RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 WDR66Q8TBY9 1149 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 U2AF1L4Q8WU68 220 aaKnown RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 HES6Q96HZ4 224 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 RTFDC1Q9BY42 306 aaPredicted RBP14.93□□□□□ -0.02
HDAC7-228ENST00000548938 NT5C3AQ9H0P0 336 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 EPB41L4BQ9H329 900 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 KDM4CQ9H3R0 1056 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 SWAP70Q9UH65 585 aa14.93□□□□□ -0.02
HDAC7-228ENST00000548938 KIF1CO43896 1103 aaKnown RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 MGRN1O60291 552 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms