RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PLA2G4FQ68DD2 849 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 GDF6Q6KF10 455 aaPredicted RBP23.55■■□□□ 1.36
CACNB3-210ENST00000548874 ANKRD33Q7Z3H0 272 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 CYP26B1Q9NR63 512 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 CCDC39Q9UFE4 941 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 PPME1Q9Y570 386 aa23.55■■□□□ 1.36
CACNB3-210ENST00000548874 E9PMD0 336 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 RARRES1P49788 294 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 NPEPPSP55786 919 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 LRRC26Q2I0M4 334 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 FAM126BQ8IXS8 530 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 TRAPPC12Q8WVT3 735 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 GBP4Q96PP9 640 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 CTAGE1Q96RT6 745 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 PLIN2Q99541 437 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 BLOC1S4Q9NUP1 217 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 FAM13BQ9NYF5 915 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 DNM3Q9UQ16 869 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 HPSEQ9Y251 543 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 MROH7Q68CQ1 1323 aa23.54■■□□□ 1.36
CACNB3-210ENST00000548874 EYA4O95677 639 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 GNAT1P11488 350 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 RTP1P59025 263 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 ZNF200P98182 395 aaPredicted RBP23.53■■□□□ 1.36
CACNB3-210ENST00000548874 TRIM60Q495X7 471 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 MTERF2Q49AM1 385 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 NAALADL2Q58DX5 795 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 XKR9Q5GH70 373 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 RASSF8Q8NHQ8 419 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 CEP170P1Q96L14 293 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 TOX2Q96NM4 488 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 SH2D3AQ9BRG2 576 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 ARID2Q68CP9 1835 aa23.53■■□□□ 1.36
CACNB3-210ENST00000548874 B4GALT4O60513 344 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 C22orf31O95567 290 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 CD4P01730 458 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 PFKFB1P16118 471 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 IGBP1P78318 339 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 E2F4Q16254 413 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 RRAGBQ5VZM2 374 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 CCDC73Q6ZRK6 1079 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 MRPS27Q92552 414 aaKnown RBP23.52■■□□□ 1.36
CACNB3-210ENST00000548874 BHMT2Q9H2M3 363 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 TRMT13Q9NUP7 481 aaKnown RBP23.52■■□□□ 1.36
CACNB3-210ENST00000548874 STK17AQ9UEE5 414 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 TUBE1Q9UJT0 475 aa23.52■■□□□ 1.36
CACNB3-210ENST00000548874 A0A1B0GVL5 298 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 TREHO43280 583 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 TLE2Q04725 743 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 PTGISQ16647 500 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 MTHFD1LQ6UB35 978 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 FSIP1Q8NA03 581 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 RAD54LQ92698 747 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 PANK2Q9BZ23 570 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 TRPV6Q9H1D0 765 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 GOLPH3LQ9H4A5 285 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 DHX33Q9H6R0 707 aaKnown RBP23.51■■□□□ 1.35
CACNB3-210ENST00000548874 KCNH3Q9ULD8 1083 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 LOXHD1Q8IVV2 1947 aa23.51■■□□□ 1.35
CACNB3-210ENST00000548874 KAT6AQ92794 2004 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 IGKV6-21A0A0C4DH24 114 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 GOLGA6L4A6NEF3 574 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 MAGEB2O15479 319 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 PQBP1O60828 265 aaKnown RBP23.5■■□□□ 1.35
CACNB3-210ENST00000548874 GADD45BO75293 160 aaPredicted RBP23.5■■□□□ 1.35
CACNB3-210ENST00000548874 MAFO75444 373 aaPredicted RBP23.5■■□□□ 1.35
CACNB3-210ENST00000548874 KLRC1P26715 233 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 SERINC5Q86VE9 423 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 LINC01465Q8N7H1 131 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 PDILTQ8N807 584 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 SYT2Q8N9I0 419 aaPredicted RBP23.5■■□□□ 1.35
CACNB3-210ENST00000548874 ZBTB10Q96DT7 871 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 PDLIM7Q9NR12 457 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 PCDHA2Q9Y5H9 948 aa23.5■■□□□ 1.35
CACNB3-210ENST00000548874 TRIP12Q14669 1992 aaPredicted RBP23.49■■□□□ 1.35
CACNB3-210ENST00000548874 ARHGEF35A5YM69 484 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 PLA2G4BP0C869 781 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 RFC5P40937 340 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 STAT6P42226 847 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 SLC12A3P55017 1021 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 TBC1D8BQ0IIM8 1120 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 LARP4BQ92615 738 aaKnown RBP23.49■■□□□ 1.35
CACNB3-210ENST00000548874 CCDC43Q96MW1 224 aaKnown RBP23.49■■□□□ 1.35
CACNB3-210ENST00000548874 PYM1Q9BRP8 204 aaKnown RBP23.49■■□□□ 1.35
CACNB3-210ENST00000548874 ATP11BQ9Y2G3 1177 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 ALPK3Q96L96 1907 aa23.49■■□□□ 1.35
CACNB3-210ENST00000548874 DCDC2CA8MYV0 355 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 TLR3O15455 904 aaKnown RBP23.48■■□□□ 1.35
CACNB3-210ENST00000548874 POLR2DO15514 142 aaKnown RBP23.48■■□□□ 1.35
CACNB3-210ENST00000548874 PRPF40AO75400 957 aaKnown RBP23.48■■□□□ 1.35
CACNB3-210ENST00000548874 DGAT1O75907 488 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 NDUFA8P51970 172 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 FAAP100Q0VG06 881 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 PTK7Q13308 1070 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 TAF2Q6P1X5 1199 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 PADI6Q6TGC4 694 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 EXOC8Q8IYI6 725 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 IQUBQ8NA54 791 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 CUEDC2Q9H467 287 aa23.48■■□□□ 1.35
CACNB3-210ENST00000548874 XPNPEP1Q9NQW7 623 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms