RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 CYP3A4P08684 503 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 BMP1P13497 986 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 IBSPP21815 317 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 KLRC1P26715 233 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 GNA11P29992 359 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 PDIA3P30101 505 aaKnown RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 KCNQ1P51787 676 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 HTRA4P83105 476 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 PLCB4Q15147 1175 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 AAK1Q2M2I8 961 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 PRR16Q569H4 304 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 IER5Q5VY09 327 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 FAM160B1Q5W0V3 765 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 SWSAP1Q6NVH7 229 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 RUFY3Q7L099 469 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 NIPA1Q7RTP0 329 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 RPAINQ86UA6 219 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 CKAP2LQ8IYA6 745 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 REXO1Q8N1G1 1221 aaKnown RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 RASGRP4Q8TDF6 673 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 CCDC12Q8WUD4 166 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 APBB2Q92870 758 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 TATDN2Q93075 761 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 HLA-CQ95604 372 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 IL17RAQ96F46 866 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 NECAB3Q96P71 396 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 UHRF1Q96T88 793 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF577Q9BSK1 485 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 IRX2Q9BZI1 471 aaPredicted RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 ZMYND12Q9H0C1 365 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 AGO3Q9H9G7 860 aaKnown RBP7.62□□□□□ -1.19
SCAF11-211ENST00000547950 GINS2Q9Y248 185 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 CDY2AQ9Y6F7 541 aa7.62□□□□□ -1.19
SCAF11-211ENST00000547950 BAZ2BQ9UIF8 2168 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 UNC80Q8N2C7 3258 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 IGLV3-22A0A075B6J6 115 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 ESYT2A0FGR8 921 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 M0QZ92 97 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 DHX15O43143 795 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 RNF40O75150 1001 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 ATG7O95352 703 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 CD52P31358 61 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 SLC26A2P50443 739 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 NLRP5P59047 1200 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 MRPS6P82932 125 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 SSRP1Q08945 709 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 MGAT3Q09327 533 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 STK3Q13188 491 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 NTRK3Q16288 839 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 EPC2Q52LR7 807 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 FBXO47Q5MNV8 452 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 MCTP2Q6DN12 878 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 MIS18BP1Q6P0N0 1132 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 PDXDC2PQ6P474 469 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 MTHFD1LQ6UB35 978 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 ABHD15Q6UXT9 468 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 TMEM192Q8IY95 271 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 FBXL16Q8N461 479 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 FIBCD1Q8N539 461 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 BICD2Q8TD16 824 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 AGXT2Q9BYV1 514 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 CELF4Q9BZC1 486 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 UPF3BQ9BZI7 483 aaKnown RBP7.61□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF302Q9NR11 478 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 TSHZ2Q9NRE2 1034 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 LMCD1Q9NZU5 365 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 VPS54Q9P1Q0 977 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 TCEAL9Q9UHQ7 104 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 COG5Q9UP83 839 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 PCDHA2Q9Y5H9 948 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 CYP46A1Q9Y6A2 500 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 CUL9Q8IWT3 2517 aa7.61□□□□□ -1.19
SCAF11-211ENST00000547950 CDH23Q9H251 3354 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 IGKV6D-21A0A0A0MT36 114 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 CPLX1O14810 134 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 HBP1O60381 514 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 RPLP2P05387 115 aaKnown RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 IFNAR1P17181 557 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 ATP4AP20648 1035 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 EVCP57679 992 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 KRT76Q01546 638 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 GPM6BQ13491 265 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 TOB2Q14106 344 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 PTPROQ16827 1216 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 TSHZ1Q6ZSZ6 1077 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 EP400NLQ6ZTU2 488 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 NUDT18Q6ZVK8 323 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 CCDC60Q8IWA6 550 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 TRIM22Q8IYM9 498 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 NME8Q8N427 588 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 METTL13Q8N6R0 699 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 ATP8B4Q8TF62 1192 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 CRYGNQ8WXF5 182 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 RNF26Q9BY78 433 aaPredicted RBP7.6□□□□□ -1.19
SCAF11-211ENST00000547950 TBC1D22BQ9NU19 505 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 PDRG1Q9NUG6 133 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms