RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 JAK3P52333 1124 aa21.07■□□□□ 0.96
CHMP1A-203ENST00000547614 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
CHMP1A-203ENST00000547614 RDM1Q8NG50 284 aa21.07■□□□□ 0.96
CHMP1A-203ENST00000547614 ASB2Q96Q27 587 aa21.07■□□□□ 0.96
CHMP1A-203ENST00000547614 PADI3Q9ULW8 664 aa21.07■□□□□ 0.96
CHMP1A-203ENST00000547614 TTC3P53804 2025 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 MAGEB2O15479 319 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 C22orf31O95567 290 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 KRT40Q6A162 431 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 FBXO22Q8NEZ5 403 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 GDPD5Q8WTR4 605 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 WASF1Q92558 559 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 C17orf80Q9BSJ5 609 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 NRBP2Q9NSY0 501 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 KCNJ14Q9UNX9 436 aa21.06■□□□□ 0.96
CHMP1A-203ENST00000547614 CTDNEP1O95476 244 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 TDP2O95551 362 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 PAK2Q13177 524 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 ODR4Q5SWX8 454 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 B3GNT9Q6UX72 402 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 RTN4RL1Q86UN2 441 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 UNC45AQ9H3U1 944 aa21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 ORC3Q9UBD5 711 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-203ENST00000547614 CCDC194A0A1B0GVG4 234 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 ZNF862O60290 1169 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 NEK4P51957 841 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 SKIV2LQ15477 1246 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 ME3Q16798 604 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 INF2Q27J81 1249 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 AAK1Q2M2I8 961 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 EPC2Q52LR7 807 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 ZNF710Q8N1W2 664 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 ETNPPLQ8TBG4 499 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 COG5Q9UP83 839 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 TTC28Q96AY4 2481 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 EVPLQ92817 2033 aa21.04■□□□□ 0.96
CHMP1A-203ENST00000547614 OATP04181 439 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 GCFC2P16383 781 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 CRYBB1P53674 252 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 PPP4R3AQ6IN85 833 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 TRMT1LQ7Z2T5 733 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 TMEM192Q8IY95 271 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 CRIPAKQ8N1N5 446 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 FIBCD1Q8N539 461 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 METTL13Q8N6R0 699 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 LINC01599Q8WXQ3 324 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 GTF3C6Q969F1 213 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 ZNF689Q96CS4 500 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 RC3H2Q9HBD1 1191 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 DDX25Q9UHL0 483 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 WDR81Q562E7 1941 aa21.03■□□□□ 0.96
CHMP1A-203ENST00000547614 COL4A4P53420 1690 aaPredicted RBP21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 LOXHD1Q8IVV2 1947 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 H3BNC9 293 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 CHMP2AO43633 222 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 RPS6KA5O75582 802 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 DGKIO75912 1065 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 SEC24BO95487 1268 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 TMOD1P28289 359 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 PRKCEQ02156 737 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 LETM2Q2VYF4 491 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 MIER3Q7Z3K6 550 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 NEK8Q86SG6 692 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 NPAS4Q8IUM7 802 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 GJA10Q969M2 543 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 FAM20AQ96MK3 541 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 NAP1L4Q99733 375 aaKnown RBP21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 CDHR5Q9HBB8 845 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 GINS2Q9Y248 185 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 RWDD3Q9Y3V2 267 aa21.02■□□□□ 0.96
CHMP1A-203ENST00000547614 REV3LO60673 3130 aa21.02■□□□□ 0.95
CHMP1A-203ENST00000547614 ADGRA3Q8IWK6 1321 aa21.02■□□□□ 0.95
CHMP1A-203ENST00000547614 GPR182O15218 404 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 RB1P06400 928 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 STAG3L1P0CL83 205 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 FDPSP14324 419 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 NFX1Q12986 1120 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 EFCAB12Q6NXP0 572 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 LINC01465Q8N7H1 131 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 NECAB1Q8N987 351 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 CLP1Q92989 425 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 MRPL38Q96DV4 380 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 TMX1Q9H3N1 280 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 ERVK-5Q9HDB9 667 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 GJB4Q9NTQ9 266 aa21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 NOC2LQ9Y3T9 749 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-203ENST00000547614 C5orf67F2Z3F1 127 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 GPR32O75388 356 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 LARGE1O95461 756 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 GPM6BQ13491 265 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 TARBP2Q15633 366 aaKnown RBP21■□□□□ 0.95
CHMP1A-203ENST00000547614 UGCGQ16739 394 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 PTPROQ16827 1216 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 KIZQ2M2Z5 673 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 TMEM266Q2M3C6 531 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 XKR3Q5GH77 459 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 OXER1Q8TDS5 423 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 TMEM40Q8WWA1 233 aa21■□□□□ 0.95
CHMP1A-203ENST00000547614 HLA-CQ95604 372 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms