RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 NECAB3Q96P71 396 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-226ENST00000547259 UIMC1Q96RL1 719 aa13.58□□□□□ -0.24
HDAC7-226ENST00000547259 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
HDAC7-226ENST00000547259 AGO4Q9HCK5 861 aaKnown RBP13.58□□□□□ -0.24
HDAC7-226ENST00000547259 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.24
HDAC7-226ENST00000547259 LINC01553A4QN01 128 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 H3BRB1 525 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 LAD1O00515 517 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 NOP56O00567 594 aaKnown RBP13.57□□□□□ -0.24
HDAC7-226ENST00000547259 TBX3O15119 743 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 MAFGO15525 162 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 ZNF286BP0CG31 522 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 ICAM3P32942 547 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
HDAC7-226ENST00000547259 HSDL1Q3SXM5 330 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 TMEM31Q5JXX7 168 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 LRCH2Q5VUJ6 765 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SLFN12Q8IYM2 578 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SEPT8Q92599 483 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SPATA32Q96LK8 384 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SCAND2PQ9GZW5 306 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-226ENST00000547259 TUT1Q9H6E5 874 aaKnown RBP13.57□□□□□ -0.24
HDAC7-226ENST00000547259 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 TCEAL9Q9UHQ7 104 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 FAM50BQ9Y247 325 aa13.57□□□□□ -0.24
HDAC7-226ENST00000547259 WDR81Q562E7 1941 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 SPATA31C2B4DYI2 1134 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 SPTLC2O15270 562 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 GAS7O60861 476 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 THPOP40225 353 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 TXKP42681 527 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 SLC39A14Q15043 492 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 PTPAQ15257 358 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 TMEM266Q2M3C6 531 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 C4orf32Q8N8J7 132 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 LINC00301Q8NCQ3 95 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 GIMAP8Q8ND71 665 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 APBB2Q92870 758 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 SLC5A5Q92911 643 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 GBP4Q96PP9 640 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 SDF4Q9BRK5 362 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 TEKT3Q9BXF9 490 aa13.56□□□□□ -0.24
HDAC7-226ENST00000547259 ZNF215Q9UL58 517 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-226ENST00000547259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 NCK2O43639 380 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 SORBS3O60504 671 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 GPR37L1O60883 481 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 KCNA2P16389 499 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 MARCKSP29966 332 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 PRPHP41219 470 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 HTRA4P83105 476 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 CSPP1Q1MSJ5 1256 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 LEXMQ3ZCV2 418 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 ARL6IP4Q66PJ3 421 aaKnown RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 DBF4BQ8NFT6 615 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 GDPD5Q8WTR4 605 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 LEO1Q8WVC0 666 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 HAS1Q92839 578 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 GJA10Q969M2 543 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 MTMR9Q96QG7 549 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 C16orf70Q9BSU1 422 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 UBE2ZQ9H832 354 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-226ENST00000547259 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
HDAC7-226ENST00000547259 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 ATP9AO75110 1047 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 RPLP2P05387 115 aaKnown RBP13.54□□□□□ -0.24
HDAC7-226ENST00000547259 HOXC8P31273 242 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 ME1P48163 572 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 FAM117BQ6P1L5 589 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-226ENST00000547259 MRPL38Q96DV4 380 aaKnown RBP13.54□□□□□ -0.24
HDAC7-226ENST00000547259 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 RIT2Q99578 217 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 SENP7Q9BQF6 1050 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 LRFN3Q9BTN0 628 aa13.54□□□□□ -0.24
HDAC7-226ENST00000547259 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-226ENST00000547259 JPH1Q9HDC5 661 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-226ENST00000547259 RCOR1Q9UKL0 485 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms