RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RNF180Q86T96 592 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 GRAMD1CQ8IYS0 662 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 DDX12PQ92771 950 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 STAMQ92783 540 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 LENG1Q96BZ8 264 aaPredicted RBP17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 MTRQ99707 1265 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 JPH2Q9BR39 696 aaPredicted RBP17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 TUBE1Q9UJT0 475 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 TRPC6Q9Y210 931 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 PCDHA5Q9Y5H7 936 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 MYMKA6NI61 221 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 ZBTB39O15060 712 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 STBD1O95210 358 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 F2P00734 622 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 MYL3P08590 195 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 ATP4AP20648 1035 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 PTGS1P23219 599 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 GUCY2CP25092 1073 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 RFC5P40937 340 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 CUL4BQ13620 913 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 ZNF484Q5JVG2 852 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 C1orf186Q6ZWK4 172 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 CCDC65Q8IXS2 484 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 MCPH1Q8NEM0 835 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 GZF1Q9H116 711 aaPredicted RBP17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 COL1A2P08123 1366 aa17.6■□□□□ 0.41
TRAFD1-203ENST00000547063 A0A087WWV3 80 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 SYCE3A1L190 88 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 GAS2O43903 313 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 ADAMTS4O75173 837 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 TBCAO75347 108 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 PGK1P00558 417 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 RPN1P04843 607 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 MARK3P27448 753 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 KCNB1Q14721 858 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 PLA2G4FQ68DD2 849 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 UNC13DQ70J99 1090 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 ARRDC4Q8NCT1 418 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 SLC7A3Q8WY07 619 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 TSEN34Q9BSV6 310 aaKnown RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 MTG1Q9BT17 334 aaPredicted RBP17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 BLZF1Q9H2G9 400 aa17.59■□□□□ 0.41
TRAFD1-203ENST00000547063 ARID2Q68CP9 1835 aa17.58■□□□□ 0.41
TRAFD1-203ENST00000547063 CABYRO75952 493 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 IDEP14735 1019 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 GAP43P17677 238 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 POLGP54098 1239 aaPredicted RBP17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 NPEPPSP55786 919 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 PURAQ00577 322 aaKnown RBP17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 BEX3Q00994 111 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 TARBP2Q15633 366 aaKnown RBP17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 MTERF2Q49AM1 385 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 DYMQ7RTS9 669 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 KLHDC9Q8NEP7 349 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 DRC1Q96MC2 740 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 RUSC1Q9BVN2 902 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 ATP6V0A4Q9HBG4 840 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 EXOC1Q9NV70 894 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 KCNG1Q9UIX4 513 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 COL4A3BPQ9Y5P4 624 aa17.58■□□□□ 0.4
TRAFD1-203ENST00000547063 RRN3P2A6NIE6 340 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 USO1O60763 962 aaKnown RBP17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 ZNF445P59923 1031 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 TBC1D8BQ0IIM8 1120 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 PSMD2Q13200 908 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 GIT2Q14161 759 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 MFSD10Q14728 455 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 ARSHQ5FYA8 562 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 LHX8Q68G74 356 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 KIFAP3Q92845 792 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 REEP2Q9BRK0 252 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 UNC93B1Q9H1C4 597 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 PANK4Q9NVE7 773 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 SEL1LQ9UBV2 794 aa17.57■□□□□ 0.4
TRAFD1-203ENST00000547063 MOXD2PA6NHM9 499 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 HAS3O00219 553 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 MAGEB2O15479 319 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 RHOBTB3O94955 611 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 FAM13AO94988 1023 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 CCL5P13501 91 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 CAPN2P17655 700 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 PSEN2P49810 448 aa17.56■□□□□ 0.4
TRAFD1-203ENST00000547063 LRRC41Q15345 812 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms