RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
DDX54-204ENST00000546898 C22orf31O95567 290 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 AMHP03971 560 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 GHRP10912 638 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 LPIN1Q14693 890 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 GRIN2CQ14957 1233 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 UGCGQ16739 394 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 TSHZ1Q6ZSZ6 1077 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 HAS1Q92839 578 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 OSBPL7Q9BZF2 842 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 VAV3Q9UKW4 847 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 KIF3AQ9Y496 699 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 COL4A6Q14031 1691 aa17.89■□□□□ 0.45
DDX54-204ENST00000546898 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 TLL1O43897 1013 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 MARCH6O60337 910 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 DKC1O60832 514 aaKnown RBP eCLIP17.88■□□□□ 0.45
DDX54-204ENST00000546898 CA3P07451 260 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 GUCY1B3Q02153 619 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 XKR3Q5GH77 459 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 FAM43BQ6ZT52 329 aaPredicted RBP17.88■□□□□ 0.45
DDX54-204ENST00000546898 MYLIPQ8WY64 445 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 ZBED2Q9BTP6 218 aa17.88■□□□□ 0.45
DDX54-204ENST00000546898 CELF4Q9BZC1 486 aaKnown RBP17.88■□□□□ 0.45
DDX54-204ENST00000546898 FOXP1Q9H334 677 aaPredicted RBP17.88■□□□□ 0.45
DDX54-204ENST00000546898 MYOGP15173 224 aa17.87■□□□□ 0.45
DDX54-204ENST00000546898 FOSL2P15408 326 aa17.87■□□□□ 0.45
DDX54-204ENST00000546898 PSMC5P62195 406 aa17.87■□□□□ 0.45
DDX54-204ENST00000546898 KIAA0319LQ8IZA0 1049 aa17.87■□□□□ 0.45
DDX54-204ENST00000546898 TTC3P53804 2025 aa17.87■□□□□ 0.45
DDX54-204ENST00000546898 NEMFO60524 1076 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 TMOD1P28289 359 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 TMEM62Q0P6H9 643 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 ORC2Q13416 577 aaPredicted RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 CALCRLQ16602 461 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX54-204ENST00000546898 TRMT1LQ7Z2T5 733 aaKnown RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 MYOCDQ8IZQ8 938 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 ZNF710Q8N1W2 664 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 LINC01465Q8N7H1 131 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 TMX3Q96JJ7 454 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 GAS2L1Q99501 681 aaPredicted RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 RAD9AQ99638 391 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 FTHL17Q9BXU8 183 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 NIFKQ9BYG3 293 aaKnown RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 SEPT9Q9UHD8 586 aaPredicted RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 COL4A4P53420 1690 aaPredicted RBP17.86■□□□□ 0.45
DDX54-204ENST00000546898 RALGAPA2Q2PPJ7 1873 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 NLRC5Q86WI3 1866 aa17.86■□□□□ 0.45
DDX54-204ENST00000546898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 EML1O00423 815 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 DLL1O00548 723 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 P4HBP07237 508 aaKnown RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 QARSP47897 775 aaKnown RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 SPIRE1Q08AE8 756 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 TBC1D8BQ0IIM8 1120 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 GNL2Q13823 731 aaKnown RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 EPHA7Q15375 998 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 TARBP2Q15633 366 aaKnown RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 TMCO2Q7Z6W1 182 aaPredicted RBP17.85■□□□□ 0.45
DDX54-204ENST00000546898 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 BANK1Q8NDB2 785 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 TOP1MTQ969P6 601 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 MAP7D2Q96T17 732 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
DDX54-204ENST00000546898 STBD1O95210 358 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 CD2BP2O95400 341 aaKnown RBP17.84■□□□□ 0.45
DDX54-204ENST00000546898 CD52P31358 61 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 HTRA4P83105 476 aaPredicted RBP17.84■□□□□ 0.45
DDX54-204ENST00000546898 PAK2Q13177 524 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 ODR4Q5SWX8 454 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 NCAPH2Q6IBW4 605 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 EFCAB12Q6NXP0 572 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 NOSTRINQ8IVI9 506 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 PRDM12Q9H4Q4 367 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 AGO3Q9H9G7 860 aaKnown RBP17.84■□□□□ 0.45
DDX54-204ENST00000546898 PCDHA12Q9UN75 941 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 PPME1Q9Y570 386 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 INSL6Q9Y581 213 aa17.84■□□□□ 0.45
DDX54-204ENST00000546898 WNT7AO00755 349 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 TRAPPC10P48553 1259 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 CLCN3P51790 818 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 CRYBB1P53674 252 aaPredicted RBP17.83■□□□□ 0.44
DDX54-204ENST00000546898 TAP1Q03518 808 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 MTERF2Q49AM1 385 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 NEK9Q8TD19 979 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
DDX54-204ENST00000546898 LXNQ9BS40 222 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 PADI3Q9ULW8 664 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 NOL7Q9UMY1 257 aaKnown RBP17.83■□□□□ 0.44
DDX54-204ENST00000546898 AKT3Q9Y243 479 aa17.83■□□□□ 0.44
DDX54-204ENST00000546898 LCHNA4D1U4 455 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 RPS6KA5O75582 802 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 U2AF2P26368 475 aaKnown RBP eCLIP17.82■□□□□ 0.44
DDX54-204ENST00000546898 KIZQ2M2Z5 673 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 FAM117BQ6P1L5 589 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 ANO5Q75V66 913 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 C4orf19Q8IY42 314 aa17.82■□□□□ 0.44
DDX54-204ENST00000546898 LRRC71Q8N4P6 559 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms