RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 AK8Q96MA6 479 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 MMTAG2Q9BU76 263 aaKnown RBP22.92■■□□□ 1.26
HMGA2-211ENST00000545998 PPP1R12CQ9BZL4 782 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 PCDHA2Q9Y5H9 948 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 SRPRBQ9Y5M8 271 aaKnown RBP22.92■■□□□ 1.26
HMGA2-211ENST00000545998 UMODL1Q5DID0 1318 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 TANC1Q9C0D5 1861 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 C22orf31O95567 290 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 YEATS4O95619 227 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 CYP2C18P33260 490 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 LONP1P36776 959 aaKnown RBP22.91■■□□□ 1.26
HMGA2-211ENST00000545998 BFSP2Q13515 415 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 ECM1Q16610 540 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 PLA2G4FQ68DD2 849 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 TAF2Q6P1X5 1199 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 CCDC155Q8N6L0 562 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 SNX29Q8TEQ0 813 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 SH2D3AQ9BRG2 576 aa22.91■■□□□ 1.26
HMGA2-211ENST00000545998 MUTP22033 750 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 CCT6AP40227 531 aaKnown RBP22.9■■□□□ 1.26
HMGA2-211ENST00000545998 STK38Q15208 465 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 MTERF2Q49AM1 385 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 KRT79Q5XKE5 535 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 POTEGQ6S5H5 508 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 OTUD6AQ7L8S5 288 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 WNT8AQ9H1J5 351 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 CYP26B1Q9NR63 512 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 CFAP45Q9UL16 551 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 ATP6V1DQ9Y5K8 247 aa22.9■■□□□ 1.26
HMGA2-211ENST00000545998 SPTLC2O15270 562 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 CKBP12277 381 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 NPEPPSP55786 919 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 MFSD5Q6N075 450 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 RPAINQ86UA6 219 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 ZNF579Q8NAF0 562 aaKnown RBP22.89■■□□□ 1.26
HMGA2-211ENST00000545998 BADQ92934 168 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 ANKEF1Q9NU02 776 aa22.89■■□□□ 1.26
HMGA2-211ENST00000545998 SCN5AQ14524 2016 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 SMIM35A0A1B0GVV1 85 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 MAGEB2O15479 319 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 XRCC6P12956 609 aaKnown RBP eCLIP22.89■■□□□ 1.25
HMGA2-211ENST00000545998 THPOP40225 353 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 PIGOQ8TEQ8 1089 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 CEP170P1Q96L14 293 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 NACC1Q96RE7 527 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 CSRNP2Q9H175 543 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 CIZ1Q9ULV3 898 aaPredicted RBP22.89■■□□□ 1.25
HMGA2-211ENST00000545998 PPME1Q9Y570 386 aa22.89■■□□□ 1.25
HMGA2-211ENST00000545998 LOXHD1Q8IVV2 1947 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 A0A087WWV3 80 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 CAND2O75155 1236 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 PPP6R2O75170 966 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 CCL23P55773 120 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 TBC1D8BQ0IIM8 1120 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 TRAF7Q6Q0C0 670 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 LINC01465Q8N7H1 131 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 KRI1Q8N9T8 703 aaKnown RBP22.88■■□□□ 1.25
HMGA2-211ENST00000545998 RETREG2Q8NC44 543 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 DNAJB3Q8WWF6 145 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 CHAMP1Q96JM3 812 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 CLIC6Q96NY7 704 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 KIAA1024Q9UPX6 916 aa22.88■■□□□ 1.25
HMGA2-211ENST00000545998 LAMA3Q16787 3333 aa22.87■■□□□ 1.25
HMGA2-211ENST00000545998 SELPP16109 830 aa22.87■■□□□ 1.25
HMGA2-211ENST00000545998 MAGEA10P43363 369 aaPredicted RBP22.87■■□□□ 1.25
HMGA2-211ENST00000545998 MDM2Q00987 491 aaPredicted RBP22.87■■□□□ 1.25
HMGA2-211ENST00000545998 XKR9Q5GH70 373 aa22.87■■□□□ 1.25
HMGA2-211ENST00000545998 HYIQ5T013 277 aa22.87■■□□□ 1.25
HMGA2-211ENST00000545998 ZNF618Q5T7W0 954 aa22.87■■□□□ 1.25
HMGA2-211ENST00000545998 LBHD1Q9BQE6 289 aaPredicted RBP22.87■■□□□ 1.25
HMGA2-211ENST00000545998 FAM49AQ9H0Q0 323 aaPredicted RBP22.87■■□□□ 1.25
HMGA2-211ENST00000545998 DDX19AQ9NUU7 478 aaKnown RBP22.87■■□□□ 1.25
HMGA2-211ENST00000545998 IGKV6-21A0A0C4DH24 114 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 MAFO75444 373 aaPredicted RBP22.86■■□□□ 1.25
HMGA2-211ENST00000545998 RPLP2P05387 115 aaKnown RBP22.86■■□□□ 1.25
HMGA2-211ENST00000545998 IQCF3P0C7M6 154 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 RARRES1P49788 294 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 LRRC8DQ7L1W4 858 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 RSPH3Q86UC2 560 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 CABP7Q86V35 215 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 KIAA0319LQ8IZA0 1049 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 TMEM199Q8N511 208 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 METTL13Q8N6R0 699 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 KCNG4Q8TDN1 519 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 DBR1Q9UK59 544 aaKnown RBP22.86■■□□□ 1.25
HMGA2-211ENST00000545998 RCOR1Q9UKL0 485 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 SIP14410 1827 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 KDM3AQ9Y4C1 1321 aa22.86■■□□□ 1.25
HMGA2-211ENST00000545998 SLC26A4O43511 780 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 UBA7P41226 1012 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 KRT85P78386 507 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 EFCAB12Q6NXP0 572 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 LRRC71Q8N4P6 559 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 TET1Q8NFU7 2136 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 SCLYQ96I15 445 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 PNMA5Q96PV4 448 aa22.85■■□□□ 1.25
HMGA2-211ENST00000545998 DHX33Q9H6R0 707 aaKnown RBP22.85■■□□□ 1.25
HMGA2-211ENST00000545998 CSF2RAP15509 400 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 RFC5P40937 340 aa22.84■■□□□ 1.25
HMGA2-211ENST00000545998 CLCN3P51790 818 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms