RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 CAVIN1Q6NZI2 390 aaKnown RBP17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 ANO5Q75V66 913 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 KCNK18Q7Z418 384 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 MTG1Q9BT17 334 aaPredicted RBP17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 C17orf75Q9HAS0 396 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 CYP26B1Q9NR63 512 aa17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
PRPF40A-212ENST00000545856 RRN3P2A6NIE6 340 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 HAS3O00219 553 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 MAGEB2O15479 319 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 ABCD1P33897 745 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 RTP1P59025 263 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 PURAQ00577 322 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 KCNB1Q14721 858 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 TARBP2Q15633 366 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 GNASQ5JWF2 1037 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 UTP14CQ5TAP6 766 aaKnown RBP17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 LHX8Q68G74 356 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 ZNF710Q8N1W2 664 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 SLC17A8Q8NDX2 589 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 KIAA1468Q9P260 1216 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 TUBE1Q9UJT0 475 aa17.81■□□□□ 0.44
PRPF40A-212ENST00000545856 CYP11B2P19099 503 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 ATP4AP20648 1035 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 DPYDQ12882 1025 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 MCM6Q14566 821 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 TPRNQ4KMQ1 711 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 XKR9Q5GH70 373 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 CCSAPQ6IQ19 270 aaPredicted RBP17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 RINT1Q6NUQ1 792 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 SH3TC2Q8TF17 1288 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 LRRC15Q8TF66 581 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 SLC7A3Q8WY07 619 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 CEP170P1Q96L14 293 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 SEL1LQ9UBV2 794 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 NRCAMQ92823 1304 aa17.8■□□□□ 0.44
PRPF40A-212ENST00000545856 FRMD3A2A2Y4 597 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 SORBS3O60504 671 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 GNAT1P11488 350 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 GAP43P17677 238 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PPP1R2P41236 205 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PSMC6P62333 389 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PSMD2Q13200 908 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PADI6Q6TGC4 694 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 C1orf186Q6ZWK4 172 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 UNC13DQ70J99 1090 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 SESTD1Q86VW0 696 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 CCDC65Q8IXS2 484 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 KIFAP3Q92845 792 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 SMARCE1Q969G3 411 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PLIN2Q99541 437 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 ATP6V0A4Q9HBG4 840 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 OGDHLQ9ULD0 1010 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 TRPC6Q9Y210 931 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 DNM1LO00429 736 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 CAVIN2O95810 425 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 SSBP05455 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 KRT18P05783 430 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 GJB1P08034 283 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 CCL5P13501 91 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PSEN2P49810 448 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 ZNF131P52739 623 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 MFSD10Q14728 455 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 LRRC41Q15345 812 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 CT47A1Q5JQC4 288 aaPredicted RBP17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 TRIM50Q86XT4 487 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 ANKLE1Q8NAG6 615 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 RETREG2Q8NC44 543 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 DDX12PQ92771 950 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 KAT2BQ92831 832 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 MTRQ99707 1265 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 TELO2Q9Y4R8 837 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
PRPF40A-212ENST00000545856 PHLPP2Q6ZVD8 1323 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 IGKV6-21A0A0C4DH24 114 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 MYMKA6NI61 221 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 KBTBD13C9JR72 458 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 TBCAO75347 108 aaKnown RBP17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 MAFO75444 373 aaPredicted RBP17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 PGK1P00558 417 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 ZNF286BP0CG31 522 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 HOXC8P31273 242 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 AFMP43652 599 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 SARSP49591 514 aaKnown RBP17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 POLGP54098 1239 aaPredicted RBP17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 ASIC1P78348 528 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 CDC42EP1Q00587 391 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
PRPF40A-212ENST00000545856 KIAA0753Q2KHM9 967 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms