RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 CCDC34Q96HJ3 373 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 CEP170P1Q96L14 293 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 NIFKQ9BYG3 293 aaKnown RBP14.5□□□□□ -0.09
CDCA3-210ENST00000545368 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 SENP6Q9GZR1 1112 aaPredicted RBP14.5□□□□□ -0.09
CDCA3-210ENST00000545368 CUEDC2Q9H467 287 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 GOLPH3LQ9H4A5 285 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 C11orf49Q9H6J7 331 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 CENPFP49454 3210 aa14.5□□□□□ -0.09
CDCA3-210ENST00000545368 A0A087X0B3 334 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 C17orf102A2RUQ5 167 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 STBD1O95210 358 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 SSBP05455 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
CDCA3-210ENST00000545368 INSRRP14616 1297 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 RARRES1P49788 294 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 IGBP1P78318 339 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 FAM160A1Q05DH4 1040 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 PTPN11Q06124 597 aaPredicted RBP14.49□□□□□ -0.09
CDCA3-210ENST00000545368 GRIK4Q16099 956 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 KCNK18Q7Z418 384 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 NECAB2Q7Z6G3 386 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 CEP57L1Q8IYX8 460 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 DIS3LQ8TF46 1054 aaKnown RBP14.49□□□□□ -0.09
CDCA3-210ENST00000545368 RAD54LQ92698 747 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 BHMT2Q9H2M3 363 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 MAGEF1Q9HAY2 307 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 CYP26B1Q9NR63 512 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 LMBRD1Q9NUN5 540 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 HDAC6Q9UBN7 1215 aa14.49□□□□□ -0.09
CDCA3-210ENST00000545368 TMEM150BA6NC51 233 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 PLA2G4BP0C869 781 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 EN2P19622 333 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-210ENST00000545368 RFC5P40937 340 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 MNX1P50219 401 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-210ENST00000545368 POLGP54098 1239 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-210ENST00000545368 NPEPPSP55786 919 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 TBC1D8BQ0IIM8 1120 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 E2F4Q16254 413 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 SESTD1Q86VW0 696 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 EXOC8Q8IYI6 725 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 SLC7A3Q8WY07 619 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 PAWRQ96IZ0 340 aaKnown RBP14.48□□□□□ -0.09
CDCA3-210ENST00000545368 JPH2Q9BR39 696 aaPredicted RBP14.48□□□□□ -0.09
CDCA3-210ENST00000545368 BLOC1S4Q9NUP1 217 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 GTF2IRD1Q9UHL9 959 aa14.48□□□□□ -0.09
CDCA3-210ENST00000545368 MROH7Q68CQ1 1323 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 A0A087WWV3 80 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 CCDC85CA6NKD9 419 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 ARVCFO00192 962 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 ZBTB39O15060 712 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 MAGEB2O15479 319 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 USO1O60763 962 aaKnown RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 KINO60870 393 aaKnown RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 DGAT1O75907 488 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 ZNF202O95125 648 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 COL6A1P12109 1028 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 DHX8Q14562 1220 aaKnown RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 MCM6Q14566 821 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 TARBP2Q15633 366 aaKnown RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 NAALADL2Q58DX5 795 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 SV2BQ7L1I2 683 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 FMR1NBQ8N0W7 255 aaPredicted RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 SYT2Q8N9I0 419 aaPredicted RBP14.47□□□□□ -0.09
CDCA3-210ENST00000545368 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 PPP1R13LQ8WUF5 828 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 LMBR1Q8WVP7 490 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 SH2D3AQ9BRG2 576 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 LRRC27Q9C0I9 530 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 ATP6V0A4Q9HBG4 840 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 SETD4Q9NVD3 440 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 TUBE1Q9UJT0 475 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
CDCA3-210ENST00000545368 GRIN2DO15399 1336 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 GAS2O43903 313 aaKnown RBP14.46□□□□□ -0.09
CDCA3-210ENST00000545368 MBD3O95983 291 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 SLFN14P0C7P3 912 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 LIG1P18858 919 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
CDCA3-210ENST00000545368 SLC12A3P55017 1021 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 AMPD3Q01432 767 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 PADI6Q6TGC4 694 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 MTHFD1LQ6UB35 978 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 SLC39A5Q6ZMH5 540 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 GPBP1Q86WP2 473 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 SLC43A3Q8NBI5 491 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 TRAPPC12Q8WVT3 735 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 MTRQ99707 1265 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 TNMDQ9H2S6 317 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 KCND2Q9NZV8 630 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 SERTAD1Q9UHV2 236 aa14.46□□□□□ -0.09
CDCA3-210ENST00000545368 ZBTB42B2RXF5 422 aa14.45□□□□□ -0.1
CDCA3-210ENST00000545368 TLR3O15455 904 aaKnown RBP14.45□□□□□ -0.1
CDCA3-210ENST00000545368 ACTN4O43707 911 aaKnown RBP14.45□□□□□ -0.1
CDCA3-210ENST00000545368 NR1I2O75469 434 aa14.45□□□□□ -0.1
CDCA3-210ENST00000545368 C22orf31O95567 290 aa14.45□□□□□ -0.1
CDCA3-210ENST00000545368 KRT18P05783 430 aaKnown RBP14.45□□□□□ -0.1
CDCA3-210ENST00000545368 KLRC1P26715 233 aa14.45□□□□□ -0.1
CDCA3-210ENST00000545368 TMOD1P28289 359 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms