RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 UNC45AQ9H3U1 944 aa13.3□□□□□ -0.28
HDAC4-216ENST00000544989 KCNMB3Q9NPA1 279 aa13.3□□□□□ -0.28
HDAC4-216ENST00000544989 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
HDAC4-216ENST00000544989 CDY2AQ9Y6F7 541 aa13.3□□□□□ -0.28
HDAC4-216ENST00000544989 JAK2O60674 1132 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 CA3P07451 260 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 GHRP10912 638 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 PRKCEQ02156 737 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-216ENST00000544989 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 B3GNT9Q6UX72 402 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 MYLIPQ8WY64 445 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
HDAC4-216ENST00000544989 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 UIMC1Q96RL1 719 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
HDAC4-216ENST00000544989 CELF4Q9BZC1 486 aaKnown RBP13.29□□□□□ -0.28
HDAC4-216ENST00000544989 PPME1Q9Y570 386 aa13.29□□□□□ -0.28
HDAC4-216ENST00000544989 MYO9BQ13459 2157 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 SLC37A4O43826 429 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 C22orf31O95567 290 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 ATP4AP20648 1035 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 PSMC5P62195 406 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 DEFB103AP81534 67 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 NR5A1Q13285 461 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 ORC2Q13416 577 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-216ENST00000544989 GNL2Q13823 731 aaKnown RBP13.28□□□□□ -0.28
HDAC4-216ENST00000544989 LPIN1Q14693 890 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 KIAA0319LQ8IZA0 1049 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 METTL13Q8N6R0 699 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 MAFAQ8NHW3 353 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-216ENST00000544989 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 TOP1MTQ969P6 601 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
HDAC4-216ENST00000544989 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
HDAC4-216ENST00000544989 XIRP2A4UGR9 3374 aa13.27□□□□□ -0.28
HDAC4-216ENST00000544989 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
HDAC4-216ENST00000544989 QARSP47897 775 aaKnown RBP13.27□□□□□ -0.29
HDAC4-216ENST00000544989 DNM2P50570 870 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 TBC1D8BQ0IIM8 1120 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 PAK2Q13177 524 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 FBXO18Q8NFZ0 1043 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 NIFKQ9BYG3 293 aaKnown RBP13.27□□□□□ -0.29
HDAC4-216ENST00000544989 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 MICAL3Q7RTP6 2002 aa13.27□□□□□ -0.29
HDAC4-216ENST00000544989 CHD7Q9P2D1 2997 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 REV3LO60673 3130 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 TRANK1O15050 2925 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 GPR182O15218 404 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-216ENST00000544989 ZNF862O60290 1169 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 NEMFO60524 1076 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 MYOGP15173 224 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 TRAPPC10P48553 1259 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 CRYBB1P53674 252 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-216ENST00000544989 HTRA4P83105 476 aaPredicted RBP13.26□□□□□ -0.29
HDAC4-216ENST00000544989 TAP1Q03518 808 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 EPHA7Q15375 998 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 CALCRLQ16602 461 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDAC4-216ENST00000544989 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 HAS1Q92839 578 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 SAMD11Q96NU1 681 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 TGS1Q96RS0 853 aaKnown RBP13.26□□□□□ -0.29
HDAC4-216ENST00000544989 YME1L1Q96TA2 773 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 VAV3Q9UKW4 847 aa13.26□□□□□ -0.29
HDAC4-216ENST00000544989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 RPS6KA5O75582 802 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 STAG3L1P0CL83 205 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 EFCAB12Q6NXP0 572 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 POTEDQ86YR6 584 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 GJA10Q969M2 543 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
HDAC4-216ENST00000544989 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 AKT3Q9Y243 479 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 GBF1Q92538 1859 aa13.25□□□□□ -0.29
HDAC4-216ENST00000544989 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 ENPP3O14638 875 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
HDAC4-216ENST00000544989 POU3F3P20264 500 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-216ENST00000544989 COL9A1P20849 921 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 CD52P31358 61 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 FOSBP53539 338 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 ERVK-21P61565 698 aa13.24□□□□□ -0.29
HDAC4-216ENST00000544989 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms