RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PDGFBP01127 241 aaPredicted RBP18.46■□□□□ 0.55
DDX55-212ENST00000544738 GHRP10912 638 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 SCG2P13521 617 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 RPS6KB1P23443 525 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 CEP55Q53EZ4 464 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 ERMP1Q7Z2K6 904 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 AGXT2Q9BYV1 514 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 JPH1Q9HDC5 661 aaPredicted RBP18.46■□□□□ 0.55
DDX55-212ENST00000544738 SLC9A2Q9UBY0 812 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 NFASCO94856 1347 aa18.46■□□□□ 0.55
DDX55-212ENST00000544738 COL4A6Q14031 1691 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 ESYT2A0FGR8 921 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 PRPF3O43395 683 aaKnown RBP18.45■□□□□ 0.54
DDX55-212ENST00000544738 CHRNA1P02708 482 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 ITGB1P05556 798 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 ZNF76P36508 570 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 SREBF1P36956 1147 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 CLK2P49760 499 aaKnown RBP18.45■□□□□ 0.54
DDX55-212ENST00000544738 FAM26DQ5JW98 314 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 RSPH3Q86UC2 560 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 ZNF689Q96CS4 500 aaPredicted RBP18.45■□□□□ 0.54
DDX55-212ENST00000544738 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 RC3H2Q9HBD1 1191 aaKnown RBP18.45■□□□□ 0.54
DDX55-212ENST00000544738 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 RALGAPA2Q2PPJ7 1873 aa18.45■□□□□ 0.54
DDX55-212ENST00000544738 NID2Q14112 1375 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 PRR23AA6NEV1 266 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 MEIS1O00470 390 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 GALR2O43603 387 aaPredicted RBP18.44■□□□□ 0.54
DDX55-212ENST00000544738 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 GLP2RO95838 553 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 ID4P47928 161 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 AKAP17AQ02040 695 aaKnown RBP18.44■□□□□ 0.54
DDX55-212ENST00000544738 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 NIPA1Q7RTP0 329 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 KLHL23Q8NBE8 558 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 CYP2W1Q8TAV3 490 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 MICAL1Q8TDZ2 1067 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 P2RX5Q93086 422 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 PGBD1Q96JS3 809 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 RIPOR3Q96MK2 946 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 ZMYND12Q9H0C1 365 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 TLE6Q9H808 572 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 PCDHGC5Q9Y5F6 944 aa18.44■□□□□ 0.54
DDX55-212ENST00000544738 MRPL42Q9Y6G3 142 aaKnown RBP18.44■□□□□ 0.54
DDX55-212ENST00000544738 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 ATG2AQ2TAZ0 1938 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 RRN3P2A6NIE6 340 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 PER2O15055 1255 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 DGKIO75912 1065 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 RPLP2P05387 115 aaKnown RBP18.43■□□□□ 0.54
DDX55-212ENST00000544738 ARP10275 920 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 GNA11P29992 359 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 EVCP57679 992 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 GRIK4Q16099 956 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 TMEM260Q9NX78 707 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 TUBE1Q9UJT0 475 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
DDX55-212ENST00000544738 MBLAC1A4D2B0 266 aaPredicted RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 CYP3A4P08684 503 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 SP100P23497 879 aaPredicted RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 MARK3P27448 753 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 NUBP1P53384 320 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 LPIN1Q14693 890 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 PAN2Q504Q3 1202 aaKnown RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 NAALADL2Q58DX5 795 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 JAKMIP3Q5VZ66 844 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 PLPPR4Q7Z2D5 763 aa18.42■□□□□ 0.54
DDX55-212ENST00000544738 RNF26Q9BY78 433 aaPredicted RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 AGO4Q9HCK5 861 aaKnown RBP18.42■□□□□ 0.54
DDX55-212ENST00000544738 IFNAR1P17181 557 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 ATF7P17544 494 aaPredicted RBP18.41■□□□□ 0.54
DDX55-212ENST00000544738 SLC26A2P50443 739 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 ACTR2P61160 394 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 REXO1Q8N1G1 1221 aaKnown RBP18.41■□□□□ 0.54
DDX55-212ENST00000544738 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 BICD2Q8TD16 824 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 ZSWIM6Q9HCJ5 1215 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
DDX55-212ENST00000544738 ATG7O95352 703 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 INSRRP14616 1297 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 PDIA3P30101 505 aaKnown RBP18.4■□□□□ 0.54
DDX55-212ENST00000544738 NBL1P41271 181 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 STAT5BP51692 787 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
DDX55-212ENST00000544738 NTRK3Q16288 839 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 MARCH8Q5T0T0 291 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 RUFY4Q6ZNE9 571 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 SUSD6Q92537 303 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 PHKBQ93100 1093 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 PCYT2Q99447 389 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
DDX55-212ENST00000544738 PLXNA3P51805 1871 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms