RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 TMEM174Q8WUU8 243 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 CNKSR1Q969H4 720 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 INPP4AQ96PE3 977 aaPredicted RBP14.24□□□□□ -0.13
CPSF7-223ENST00000544669 HSD17B14Q9BPX1 270 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 CAPS2Q9BXY5 557 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 STK33Q9BYT3 514 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 SLITRK6Q9H5Y7 841 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 SALL4Q9UJQ4 1053 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 TMEM59LQ9UK28 342 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 PNMA2Q9UL42 364 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 ATAD5Q96QE3 1844 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 NPHP3-ACAD11A0A0J9YXS1 232 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-223ENST00000544669 FAM86B1E9PN63 330 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 PGRMC1O00264 195 aaKnown RBP14.23□□□□□ -0.13
CPSF7-223ENST00000544669 PLSCR1O15162 318 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 FAM86B2P0C5J1 330 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 MYBL2P10244 700 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 STAT3P40763 770 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 RINT1Q6NUQ1 792 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 LRRC31Q6UY01 552 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 SIAH1Q8IUQ4 282 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 KIAA0825Q8IV33 1275 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 SLC9A9Q8IVB4 645 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 SAMD3Q8N6K7 520 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 ISCUQ9H1K1 167 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 EPB41L5Q9HCM4 733 aa14.23□□□□□ -0.13
CPSF7-223ENST00000544669 TTC7AQ9ULT0 858 aaPredicted RBP14.23□□□□□ -0.13
CPSF7-223ENST00000544669 RRP15Q9Y3B9 282 aaKnown RBP14.23□□□□□ -0.13
CPSF7-223ENST00000544669 P4HA2O15460 535 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 PRELPP51888 382 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 JAM2P57087 298 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ARID5AQ03989 594 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 TCP10Q12799 353 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 DCAF17Q5H9S7 520 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-223ENST00000544669 SPDYCQ5MJ68 293 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 LRCH2Q5VUJ6 765 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 OTOP1Q7RTM1 612 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 PEX26Q7Z412 305 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 SLFN11Q7Z7L1 901 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 FAM186BQ8IYM0 893 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 MYCT1Q8N699 235 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 SLC5A5Q92911 643 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.132e-7■■■■□ 22.5
CPSF7-223ENST00000544669 TAF1DQ9H5J8 278 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-223ENST00000544669 PRR12Q9ULL5 1215 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 HMGB1P1B2RPK0 211 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-223ENST00000544669 EBAG9O00559 213 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 KCNK3O14649 394 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 NCK2O43639 380 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ECE2O60344 883 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 AKAP3O75969 853 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ERLIN2O94905 339 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 SLC9A1P19634 815 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ZNF131P52739 623 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 GUCY2DQ02846 1103 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 B4GALNT4Q76KP1 1039 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ZNF571Q7Z3V5 609 aaPredicted RBP14.22□□□□□ -0.13
CPSF7-223ENST00000544669 IQCKQ8N0W5 287 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 IWS1Q96ST2 819 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 RIT2Q99578 217 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 TIPINQ9BVW5 301 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 DEFB129Q9H1M3 183 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 TMEM206Q9H813 350 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 GCNT4Q9P109 453 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 TMX2Q9Y320 296 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 NRXN2Q9P2S2 1712 aa14.22□□□□□ -0.13
CPSF7-223ENST00000544669 ASTN1O14525 1302 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 MYH4Q9Y623 1939 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 MYO1CO00159 1063 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 ZEB2O60315 1214 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 GAS7O60861 476 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 PSMD10O75832 226 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 FTCDO95954 541 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 TMEM253P0C7T8 217 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 BCRP11274 1271 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 GUCY2CP25092 1073 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 GBP1P32455 592 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 SOX5P35711 763 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
CPSF7-223ENST00000544669 USH1GQ495M9 461 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 C1orf186Q6ZWK4 172 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 ZFPM1Q8IX07 1006 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 HDAC7Q8WUI4 952 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 GJA10Q969M2 543 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■□□□□ 9.3
CPSF7-223ENST00000544669 KRT12Q99456 494 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 MAP3K20Q9NYL2 800 aaKnown RBP14.21□□□□□ -0.13
CPSF7-223ENST00000544669 AMFRQ9UKV5 643 aa14.21□□□□□ -0.13
CPSF7-223ENST00000544669 FRMPD4Q14CM0 1322 aa14.21□□□□□ -0.14
CPSF7-223ENST00000544669 IGLV3-22A0A075B6J6 115 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MEIS1O00470 390 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 GH2P01242 217 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 MYBP10242 640 aa14.2□□□□□ -0.14
CPSF7-223ENST00000544669 KRT13P13646 458 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms