RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 MRPS6P82932 125 aaKnown RBP12.87□□□□□ -0.35
YBX3-216ENST00000544622 IER5Q5VY09 327 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 MIER3Q7Z3K6 550 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 SEPT8Q92599 483 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 APBB2Q92870 758 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 TOP1MTQ969P6 601 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
YBX3-216ENST00000544622 CELF4Q9BZC1 486 aaKnown RBP12.87□□□□□ -0.35
YBX3-216ENST00000544622 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
YBX3-216ENST00000544622 NRBP2Q9NSY0 501 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 TCEAL9Q9UHQ7 104 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
YBX3-216ENST00000544622 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 SIP14410 1827 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 IGKV6-21A0A0C4DH24 114 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 MAGEB2O15479 319 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 GPR32O75388 356 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 GHRP10912 638 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.353e-8■■■□□ 14.9
YBX3-216ENST00000544622 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 PRKCEQ02156 737 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 TMCO2Q7Z6W1 182 aaPredicted RBP12.86□□□□□ -0.35
YBX3-216ENST00000544622 CKAP2LQ8IYA6 745 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 SLFN12Q8IYM2 578 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 USP38Q8NB14 1042 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
YBX3-216ENST00000544622 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 WRAP73Q9P2S5 460 aaPredicted RBP12.86□□□□□ -0.35
YBX3-216ENST00000544622 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
YBX3-216ENST00000544622 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 P4HBP07237 508 aaKnown RBP12.85□□□□□ -0.35
YBX3-216ENST00000544622 CA3P07451 260 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 KCNJ6P48051 423 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 FOSBP53539 338 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 PSMC5P62195 406 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
YBX3-216ENST00000544622 TMEM62Q0P6H9 643 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 EPHA7Q15375 998 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 SAFBQ15424 915 aaKnown RBP eCLIP12.85□□□□□ -0.35
YBX3-216ENST00000544622 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
YBX3-216ENST00000544622 ANO5Q75V66 913 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 TRMT1LQ7Z2T5 733 aaKnown RBP12.85□□□□□ -0.35
YBX3-216ENST00000544622 RTN4RL1Q86UN2 441 aaPredicted RBP12.85□□□□□ -0.35
YBX3-216ENST00000544622 NOSTRINQ8IVI9 506 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 TMEM40Q8WWA1 233 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 HSD17B14Q9BPX1 270 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 CDHR5Q9HBB8 845 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 TRPV2Q9Y5S1 764 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 WDR81Q562E7 1941 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 GBF1Q92538 1859 aa12.85□□□□□ -0.35
YBX3-216ENST00000544622 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
YBX3-216ENST00000544622 ENPP3O14638 875 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 NEMFO60524 1076 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 SLITRK3O94933 977 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 QARSP47897 775 aaKnown RBP12.84□□□□□ -0.35
YBX3-216ENST00000544622 TAP1Q03518 808 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 RAD9AQ99638 391 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 PADI3Q9ULW8 664 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 REV3LO60673 3130 aa12.84□□□□□ -0.35
YBX3-216ENST00000544622 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TMEM150BA6NC51 233 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TLL1O43897 1013 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 AMHP03971 560 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 CD52P31358 61 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TRAPPC10P48553 1259 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 CUL4AQ13619 759 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 CALCRLQ16602 461 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 MYLIPQ8WY64 445 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 RC3H2Q9HBD1 1191 aaKnown RBP12.83□□□□□ -0.36
YBX3-216ENST00000544622 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
YBX3-216ENST00000544622 M0QZ92 97 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 MAFO75444 373 aaPredicted RBP12.82□□□□□ -0.36
YBX3-216ENST00000544622 LYPLA2O95372 231 aa12.82□□□□□ -0.36
YBX3-216ENST00000544622 POU3F3P20264 500 aaPredicted RBP12.82□□□□□ -0.36
YBX3-216ENST00000544622 GJB2P29033 226 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms