RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 H0Y858 1186 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 DDX3XO00571 662 aaKnown RBP eCLIP3.29□□□□□ -1.88
YBX3-214ENST00000544501 MAFGO15525 162 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 CUTAO60888 179 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ULK1O75385 1050 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 KLHL18O94889 574 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 PRLP01236 227 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ZSCAN22P10073 491 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 NCLP19338 710 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 POU3F3P20264 500 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 APEX1P27695 318 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 MC4RP32245 332 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 GLRBP48167 497 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 SLURP1P55000 103 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 SESN3P58005 492 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 IL13RA1P78552 427 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 KIAA2012Q0VF49 1180 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 TERF2Q15554 542 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ATP13A4Q4VNC1 1196 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 TTC38Q5R3I4 469 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 RNF219Q5W0B1 726 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 KANK2Q63ZY3 851 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 TIGD7Q6NT04 549 aaPredicted RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 ESRP1Q6NXG1 681 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 TRMT10BQ6PF06 316 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 FRMD7Q6ZUT3 714 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 SP8Q8IXZ3 490 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ADAMTS17Q8TE56 1095 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ZCCHC14Q8WYQ9 949 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 SLC5A5Q92911 643 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 MAML3Q96JK9 1138 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 YTHDC1Q96MU7 727 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 TACO1Q9BSH4 297 aaKnown RBP3.29□□□□□ -1.88
YBX3-214ENST00000544501 AMNQ9BXJ7 453 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 ATP8A1Q9Y2Q0 1164 aa3.29□□□□□ -1.88
YBX3-214ENST00000544501 GPR39O43194 453 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 POLD1P28340 1107 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 KCNC1P48547 511 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 BCAR1P56945 870 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 JAG1P78504 1218 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 SLC6A3Q01959 620 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 MAP3K12Q12852 859 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 STAT4Q14765 748 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 DDB1Q16531 1140 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 BROXQ5VW32 411 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 SLFN12LQ6IEE8 588 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 Q6ZUG5 572 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 KANSL1Q7Z3B3 1105 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 FAM124AQ86V42 546 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 RASSF3Q86WH2 238 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 ZNF761Q86XN6 746 aaPredicted RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 REXO1L1PQ8IX06 675 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 KLHL36Q8N4N3 616 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 C7orf31Q8N865 590 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 MARCH10Q8NA82 808 aaPredicted RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 TXNDC5Q8NBS9 432 aaKnown RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 ATL2Q8NHH9 583 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 WDR66Q8TBY9 1149 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 ERCC4Q92889 916 aaPredicted RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 AJUBAQ96IF1 538 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 LCORQ96JN0 433 aaPredicted RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 TUBGCP5Q96RT8 1024 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 KATNBL1Q9H079 304 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 TMEM168Q9H0V1 697 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 WNT8AQ9H1J5 351 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 BARX1Q9HBU1 254 aaPredicted RBP3.28□□□□□ -1.88
YBX3-214ENST00000544501 KCNG1Q9UIX4 513 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 COL4A3BPQ9Y5P4 624 aa3.28□□□□□ -1.88
YBX3-214ENST00000544501 PHLDB1Q86UU1 1377 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 A0A1B0GTL3 188 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 MROH6A6NGR9 719 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 NOBOXO60393 691 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 TRIM13O60858 407 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 RAB11FIP3O75154 756 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 SASH1O94885 1247 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 CYP1A1P04798 512 aaPredicted RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 IBSPP21815 317 aaPredicted RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 ID4P47928 161 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 GJA9P57773 515 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 CD83Q01151 205 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 AMPD3Q01432 767 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 NFATC3Q12968 1075 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 TOP3AQ13472 1001 aaPredicted RBP3.27□□□□□ -1.89
YBX3-214ENST00000544501 PTPROQ16827 1216 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 VMACQ2NL98 169 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 RGL3Q3MIN7 710 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 WDR72Q3MJ13 1102 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 PHF19Q5T6S3 580 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 TMEM200BQ69YZ2 307 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 MCTP2Q6DN12 878 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 GRAMD4Q6IC98 578 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 KIAA1841Q6NSI8 718 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 LRSAM1Q6UWE0 723 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 LCNL1Q6ZST4 164 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 ESPNLQ6ZVH7 1005 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 NECAB2Q7Z6G3 386 aa3.27□□□□□ -1.89
YBX3-214ENST00000544501 DDX42Q86XP3 938 aaKnown RBP eCLIP3.27□□□□□ -1.89
YBX3-214ENST00000544501 SPATS2Q86XZ4 545 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms