RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 VIL1P09327 827 aaKnown RBP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 USP14P54578 494 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 PSMD2Q13200 908 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 MAPK8IP2Q13387 824 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 R3HDM1Q15032 1099 aaKnown RBP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 MICALL2Q8IY33 904 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 FLAD1Q8NFF5 587 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 ATG4CQ96DT6 458 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 MYOZ2Q9NPC6 264 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 ANKRD63C9JTQ0 380 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 TUBB4AP04350 444 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 FAM153BP0C7A2 387 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 USP8P40818 1118 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 PEX3P56589 373 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 ZNF211Q13398 564 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 FAM153CQ494X1 144 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 SND1Q7KZF4 910 aaKnown RBP eCLIP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 CPNE8Q86YQ8 564 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 SLC35C1Q96A29 364 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 SAAL1Q96ER3 474 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 RANBP17Q9H2T7 1088 aaKnown RBP4.13□□□□□ -1.75
BRCA2-206ENST00000544455 OSGEPQ9NPF4 335 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 GCNT4Q9P109 453 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 FAM153AQ9UHL3 310 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 MYO3BQ8WXR4 1341 aa4.13□□□□□ -1.75
BRCA2-206ENST00000544455 BAZ2AQ9UIF9 1905 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 TACC1O75410 805 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 XRCC5P13010 732 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 FSTL1Q12841 308 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 NLGN2Q8NFZ4 835 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 JDP2Q8WYK2 163 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 KAT5Q92993 513 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 TRIM31Q9BZY9 425 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 HACL1Q9UJ83 578 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GUCY2FP51841 1108 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 HMGCS2P54868 508 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SLC9C1Q4G0N8 1177 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 EPC2Q52LR7 807 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CIAPIN1Q6FI81 312 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 IQCEQ6IPM2 695 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 C1orf186Q6ZWK4 172 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 ERMNQ8TAM6 284 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CNKSR2Q8WXI2 1034 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 BTBD6Q96KE9 485 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 PPP1R16BQ96T49 567 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 MXRA8Q9BRK3 442 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CBWD1Q9BRT8 395 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 LRRC4CQ9HCJ2 640 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 ARHGEF35A5YM69 484 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GCLMP48507 274 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 DAB2IPQ5VWQ8 1189 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 KCTD16Q68DU8 428 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CREG2Q8IUH2 290 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 FAM186BQ8IYM0 893 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CCDC170Q8IYT3 715 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 MSANTD4Q8NCY6 345 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 OR2W6PQ8NHA6 318 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 FIZ1Q96SL8 496 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 RPAP3Q9H6T3 665 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SIX2Q9NPC8 291 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CCDC169A6NNP5 214 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 ERLIN1O75477 346 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 RPS6P62753 249 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 PRPF4BQ13523 1007 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 HYIQ5T013 277 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SCARA3Q6AZY7 606 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 TRIM58Q8NG06 486 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SLC20A1Q8WUM9 679 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 DNAJC12Q9UKB3 198 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 TCHHQ07283 1943 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 KCNK3O14649 394 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GGCXP38435 758 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SF3A3Q12874 501 aaKnown RBP eCLIP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 EEPD1Q7L9B9 569 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 INTS2Q9H0H0 1204 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 UBE2TQ9NPD8 197 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SNX12Q9UMY4 172 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SBF2Q86WG5 1849 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 EYA4O95677 639 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GLI1P08151 1106 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CDR1P51861 262 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SF3B2Q13435 895 aaKnown RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 EPHA7Q15375 998 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 ASTE1Q2TB18 679 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 COBLL1Q53SF7 1204 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 DDX42Q86XP3 938 aaKnown RBP eCLIP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CCDC127Q96BQ5 260 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 KRT12Q99456 494 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GANQ9H2C0 597 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CEP104O60308 925 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SPATA4Q8NEY3 305 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 FAM20AQ96MK3 541 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 ALS2CR12Q96Q35 445 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 SELENOOQ9BVL4 669 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 FAM204AQ9H8W3 233 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 NFU1Q9UMS0 254 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 IGSF9BQ9UPX0 1349 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 GRID2IPA4D2P6 1211 aa4.12□□□□□ -1.75
BRCA2-206ENST00000544455 CALUO43852 315 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-206ENST00000544455 RNF40O75150 1001 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms