RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 C22orf31O95567 290 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 MMP1P03956 469 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 MIER3Q7Z3K6 550 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 SP7Q8TDD2 431 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-208ENST00000544432 FTHL17Q9BXU8 183 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 AGO3Q9H9G7 860 aaKnown RBP15.69■□□□□ 0.1
VAMP1-208ENST00000544432 SH2B1Q9NRF2 756 aaPredicted RBP15.69■□□□□ 0.1
VAMP1-208ENST00000544432 UNC80Q8N2C7 3258 aa15.69■□□□□ 0.1
VAMP1-208ENST00000544432 PTPRSQ13332 1948 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 LCHNA4D1U4 455 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 ENPP3O14638 875 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 DTNBO60941 627 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 OATP04181 439 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 ERVK-21P61565 698 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 PRKCEQ02156 737 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 PPP2R5CQ13362 524 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 TRIM29Q14134 588 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 EARS2Q5JPH6 523 aaKnown RBP15.68■□□□□ 0.1
VAMP1-208ENST00000544432 LINC01465Q8N7H1 131 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 GJA10Q969M2 543 aa15.68■□□□□ 0.1
VAMP1-208ENST00000544432 TGS1Q96RS0 853 aaKnown RBP15.68■□□□□ 0.1
VAMP1-208ENST00000544432 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
VAMP1-208ENST00000544432 MYH9P35579 1960 aaKnown RBP15.67■□□□□ 0.1
VAMP1-208ENST00000544432 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 CHMP2AO43633 222 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 CCNT1O60563 726 aaKnown RBP15.67■□□□□ 0.1
VAMP1-208ENST00000544432 IGFBP4P22692 258 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 NR5A1Q13285 461 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 TARBP2Q15633 366 aaKnown RBP15.67■□□□□ 0.1
VAMP1-208ENST00000544432 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 KRT40Q6A162 431 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 FAM117BQ6P1L5 589 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.67■□□□□ 0.1
VAMP1-208ENST00000544432 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 HAS1Q92839 578 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 VAV3Q9UKW4 847 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
VAMP1-208ENST00000544432 EPOPA6NHQ4 379 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 BTBD18B2RXH4 712 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 STBD1O95210 358 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 TMOD1P28289 359 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 CD52P31358 61 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
VAMP1-208ENST00000544432 PSMC5P62195 406 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
VAMP1-208ENST00000544432 TMEM62Q0P6H9 643 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 RABEP1Q15276 862 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 UGCGQ16739 394 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 DIS3L2Q8IYB7 885 aaKnown RBP15.66■□□□□ 0.1
VAMP1-208ENST00000544432 SLFN12Q8IYM2 578 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 SAMD11Q96NU1 681 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 CERS4Q9HA82 394 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 LMCD1Q9NZU5 365 aa15.66■□□□□ 0.1
VAMP1-208ENST00000544432 RBAK-RBAKDNI3L0D1 243 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 GPR32O75388 356 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 BAG4O95429 457 aaKnown RBP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 P4HBP07237 508 aaKnown RBP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 PAK2Q13177 524 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 EFCAB12Q6NXP0 572 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 CCDC83Q8IWF9 413 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 CRIPAKQ8N1N5 446 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 METTL13Q8N6R0 699 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 CEP89Q96ST8 783 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 YME1L1Q96TA2 773 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 TSPYL2Q9H2G4 693 aaPredicted RBP15.65■□□□□ 0.1
VAMP1-208ENST00000544432 CDHR5Q9HBB8 845 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 MTCH2Q9Y6C9 303 aa15.65■□□□□ 0.1
VAMP1-208ENST00000544432 COL4A6Q14031 1691 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 SIP14410 1827 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 FAM205CA6NFA0 338 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 RFXAPO00287 272 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 EML1O00423 815 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 GPR182O15218 404 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 LPXNO60711 386 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 UPP2O95045 317 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 QARSP47897 775 aaKnown RBP15.64■□□□□ 0.09
VAMP1-208ENST00000544432 TTC3P53804 2025 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 CDC42EP1Q00587 391 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 EPHA7Q15375 998 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
VAMP1-208ENST00000544432 TRMT1LQ7Z2T5 733 aaKnown RBP15.64■□□□□ 0.09
VAMP1-208ENST00000544432 LINC01599Q8WXQ3 324 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 MAP7D2Q96T17 732 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 UPF2Q9HAU5 1272 aaKnown RBP15.64■□□□□ 0.09
VAMP1-208ENST00000544432 ERVK-5Q9HDB9 667 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 PPME1Q9Y570 386 aa15.64■□□□□ 0.09
VAMP1-208ENST00000544432 WDR81Q562E7 1941 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 IGKV6-21A0A0C4DH24 114 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 MARCH6O60337 910 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 RPS6KA5O75582 802 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 CLCN3P51790 818 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 TBC1D8BQ0IIM8 1120 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 GRB10Q13322 594 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 KIZQ2M2Z5 673 aa15.63■□□□□ 0.09
VAMP1-208ENST00000544432 SPRED2Q7Z698 418 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms