RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 TTC22Q5TAA0 569 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 COLGALT1Q8NBJ5 622 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 CWH43Q9H720 699 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 TYW1Q9NV66 732 aaKnown RBP17.71■□□□□ 0.43
CD4-212ENST00000544344 NFASCO94856 1347 aa17.71■□□□□ 0.42
CD4-212ENST00000544344 IGKV6D-21A0A0A0MT36 114 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 ATG7O95352 703 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 ARP10275 920 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 RXRAP19793 462 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
CD4-212ENST00000544344 ANKRD54Q6NXT1 300 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 KIAA0319LQ8IZA0 1049 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 RASGRP4Q8TDF6 673 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 ADAM2Q99965 735 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 AAASQ9NRG9 546 aa17.7■□□□□ 0.42
CD4-212ENST00000544344 MYO10Q9HD67 2058 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 KLRC1P26715 233 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 GNAQP50148 359 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 FAM189BP81408 668 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 APOBRQ0VD83 1088 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 SPOUT1Q5T280 376 aaKnown RBP17.69■□□□□ 0.42
CD4-212ENST00000544344 PDE12Q6L8Q7 609 aaKnown RBP17.69■□□□□ 0.42
CD4-212ENST00000544344 FAM43BQ6ZT52 329 aaPredicted RBP17.69■□□□□ 0.42
CD4-212ENST00000544344 SLC24A5Q71RS6 500 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 MAP4K1Q92918 833 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
CD4-212ENST00000544344 C1orf112Q9NSG2 853 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 TMEM260Q9NX78 707 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 CDH22Q9UJ99 828 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 ST3GAL5Q9UNP4 418 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 LZTS1Q9Y250 596 aa17.69■□□□□ 0.42
CD4-212ENST00000544344 PTPRZ1P23471 2315 aaPredicted RBP17.69■□□□□ 0.42
CD4-212ENST00000544344 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 H0Y858 1186 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
CD4-212ENST00000544344 SGSM2O43147 1006 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 CCNE2O96020 404 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 FGFR1P11362 822 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 TECP42680 631 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 PLCB3Q01970 1234 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 RUFY2Q8WXA3 655 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 ATOH1Q92858 354 aaPredicted RBP17.68■□□□□ 0.42
CD4-212ENST00000544344 RIPOR3Q96MK2 946 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 SDF4Q9BRK5 362 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 MTA3Q9BTC8 594 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 APOL5Q9BWW9 433 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 AGO4Q9HCK5 861 aaKnown RBP17.68■□□□□ 0.42
CD4-212ENST00000544344 RNF19AQ9NV58 838 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 VPS13AQ96RL7 3174 aa17.68■□□□□ 0.42
CD4-212ENST00000544344 RIF1Q5UIP0 2472 aaKnown RBP17.67■□□□□ 0.42
CD4-212ENST00000544344 DENND3A2RUS2 1198 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 PROB1E7EW31 1015 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 PRC1O43663 620 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 SLC26A2P50443 739 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 DSC3Q14574 896 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 PLPP4Q5VZY2 271 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 FAM228AQ86W67 206 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 RAB11FIP4Q86YS3 637 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 MRPS27Q92552 414 aaKnown RBP17.67■□□□□ 0.42
CD4-212ENST00000544344 PGBD1Q96JS3 809 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 TMEM161AQ9NX61 479 aa17.67■□□□□ 0.42
CD4-212ENST00000544344 MEIS1O00470 390 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 LAG3P18627 525 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
CD4-212ENST00000544344 CEP55Q53EZ4 464 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 LLGL2Q6P1M3 1020 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 ABHD15Q6UXT9 468 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 EXOC6Q8TAG9 804 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 IRF2BPLQ9H1B7 796 aa17.66■□□□□ 0.42
CD4-212ENST00000544344 ELAC1Q9H777 363 aaKnown RBP17.66■□□□□ 0.42
CD4-212ENST00000544344 RBM8AQ9Y5S9 174 aaKnown RBP17.66■□□□□ 0.42
CD4-212ENST00000544344 GPR182O15218 404 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 GALR2O43603 387 aaPredicted RBP17.65■□□□□ 0.42
CD4-212ENST00000544344 HBP1O60381 514 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 HOXB8P17481 243 aaPredicted RBP17.65■□□□□ 0.42
CD4-212ENST00000544344 ATP4AP20648 1035 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 NUBP1P53384 320 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 WWC2Q6AWC2 1192 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 ASCL5Q7RTU5 278 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 CCDC60Q8IWA6 550 aaPredicted RBP17.65■□□□□ 0.42
CD4-212ENST00000544344 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 KREMEN2Q8NCW0 462 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 CASD1Q96PB1 797 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 ATP6V0A4Q9HBG4 840 aa17.65■□□□□ 0.42
CD4-212ENST00000544344 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms