RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RBL2Q08999 1139 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 PPFIBP1Q86W92 1011 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 MPHOSPH6Q99547 160 aaKnown RBP21.9■■□□□ 1.1
COPS7A-218ENST00000543939 NOC4LQ9BVI4 516 aaKnown RBP21.9■■□□□ 1.1
COPS7A-218ENST00000543939 TIPINQ9BVW5 301 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 PLXNB2O15031 1838 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 AKR1B15C9JRZ8 316 aaPredicted RBP21.89■■□□□ 1.1
COPS7A-218ENST00000543939 PDXKO00764 312 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 ATG7O95352 703 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 SUPT20HL2P0C7V6 817 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 UTP14CQ5TAP6 766 aaKnown RBP21.89■■□□□ 1.1
COPS7A-218ENST00000543939 WDR78Q5VTH9 848 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 SWSAP1Q6NVH7 229 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 MIS18BP1Q6P0N0 1132 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 ANO5Q75V66 913 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 CYFIP1Q7L576 1253 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 ZNF720Q7Z2F6 126 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 TMEM139Q8IV31 216 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 EFCC1Q9HA90 598 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 MORF4L1Q9UBU8 362 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 UBE4BO95155 1302 aa21.89■■□□□ 1.1
COPS7A-218ENST00000543939 PLXNA1Q9UIW2 1896 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 USO1O60763 962 aaKnown RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 GYPCP04921 128 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 TGFB3P10600 412 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 UBA1P22314 1058 aaKnown RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 KCNJ6P48051 423 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 GCLCP48506 637 aaPredicted RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 CCNA1P78396 465 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 SP4Q02446 784 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 MAN2A1Q16706 1144 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 XKR9Q5GH70 373 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 ODR4Q5SWX8 454 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 PLA2G4FQ68DD2 849 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 CHADLQ6NUI6 762 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 CCDC60Q8IWA6 550 aaPredicted RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 FAM178BQ8IXR5 827 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 MORC4Q8TE76 937 aa21.89■■□□□ 1.09
COPS7A-218ENST00000543939 CCDC43Q96MW1 224 aaKnown RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.09
COPS7A-218ENST00000543939 LOC102724159A0A0B4J2E5 919 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 PES1O00541 588 aaKnown RBP21.88■■□□□ 1.09
COPS7A-218ENST00000543939 SORBS3O60504 671 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 GNA14O95837 355 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 NPEPPSP55786 919 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 MARSP56192 900 aaKnown RBP21.88■■□□□ 1.09
COPS7A-218ENST00000543939 TBC1D8BQ0IIM8 1120 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 TRIM14Q14142 442 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 PWP2Q15269 919 aaKnown RBP21.88■■□□□ 1.09
COPS7A-218ENST00000543939 VWA3BQ502W6 1294 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 OTUD6AQ7L8S5 288 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 ANKRD13CQ8N6S4 541 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 PANX2Q96RD6 677 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 STRA6Q9BX79 667 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 KCND1Q9NSA2 647 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 SYNGAP1Q96PV0 1343 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 IGSF9BQ9UPX0 1349 aa21.88■■□□□ 1.09
COPS7A-218ENST00000543939 CALUO43852 315 aaPredicted RBP21.87■■□□□ 1.09
COPS7A-218ENST00000543939 MAPTP10636 758 aaKnown RBP21.87■■□□□ 1.09
COPS7A-218ENST00000543939 KCNA1Q09470 495 aa21.87■■□□□ 1.09
COPS7A-218ENST00000543939 ADAM9Q13443 819 aa21.87■■□□□ 1.09
COPS7A-218ENST00000543939 STXBP4Q6ZWJ1 553 aa21.87■■□□□ 1.09
COPS7A-218ENST00000543939 ZNF526Q8TF50 670 aaPredicted RBP21.87■■□□□ 1.09
COPS7A-218ENST00000543939 PTPN18Q99952 460 aa21.87■■□□□ 1.09
COPS7A-218ENST00000543939 SH2D3AQ9BRG2 576 aa21.87■■□□□ 1.09
COPS7A-218ENST00000543939 CETN3O15182 167 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 MFAP3LO75121 409 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 OFD1O75665 1012 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 PPP1R37O75864 691 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 FARP2O94887 1054 aaPredicted RBP21.86■■□□□ 1.09
COPS7A-218ENST00000543939 CASP14P31944 242 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 FXR1P51114 621 aaKnown RBP eCLIP21.86■■□□□ 1.09
COPS7A-218ENST00000543939 NEDD9Q14511 834 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 ZC2HC1CQ53FD0 456 aaPredicted RBP21.86■■□□□ 1.09
COPS7A-218ENST00000543939 MAEAQ7L5Y9 396 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 CPLX3Q8WVH0 158 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 ERGIC2Q96RQ1 377 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 NDST4Q9H3R1 872 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 LARSQ9P2J5 1176 aaKnown RBP21.86■■□□□ 1.09
COPS7A-218ENST00000543939 ZMYM2Q9UBW7 1377 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 TGFB1I1O43294 461 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 PLS3P13797 630 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 NR2F2P24468 414 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 HUNKP57058 714 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 CCDC40Q4G0X9 1142 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 EEPD1Q7L9B9 569 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 CNGA4Q8IV77 575 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 DRC1Q96MC2 740 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 BAG1Q99933 345 aaPredicted RBP21.86■■□□□ 1.09
COPS7A-218ENST00000543939 PCDHB13Q9Y5F0 798 aa21.86■■□□□ 1.09
COPS7A-218ENST00000543939 IGKV6D-21A0A0A0MT36 114 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 STX10O60499 249 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 TPM1P09493 284 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 PRKCEQ02156 737 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 NFIL3Q16649 462 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 FKBP15Q5T1M5 1219 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 KCNV1Q6PIU1 500 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 TRMT1LQ7Z2T5 733 aaKnown RBP21.85■■□□□ 1.09
COPS7A-218ENST00000543939 CCDC51Q96ER9 411 aa21.85■■□□□ 1.09
COPS7A-218ENST00000543939 PARK7Q99497 189 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms