RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 GDF15Q99988 308 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 LBHD1Q9BQE6 289 aaPredicted RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 RAB34Q9BZG1 259 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 TUFT1Q9NNX1 390 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 TFIP11Q9UBB9 837 aaKnown RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 CSF2RAP15509 400 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 RPA1P27694 616 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 MARCKSP29966 332 aaPredicted RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 YWHABP31946 246 aaKnown RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 THPOP40225 353 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 NPEPPSP55786 919 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 ECM1Q16610 540 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 ZNF618Q5T7W0 954 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 TAF2Q6P1X5 1199 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 LRRC8DQ7L1W4 858 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 SNX29Q8TEQ0 813 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 DNAJB3Q8WWF6 145 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 MMTAG2Q9BU76 263 aaKnown RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 FAM49AQ9H0Q0 323 aaPredicted RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
CD9-210ENST00000543916 FBXO2Q9UK22 296 aaPredicted RBP16.89■□□□□ 0.29
CD9-210ENST00000543916 LOXHD1Q8IVV2 1947 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 A0A087WWV3 80 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 SMIM35A0A1B0GVV1 85 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 CTSHP09668 335 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 IQCF3P0C7M6 154 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 SELPP16109 830 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 CCT6AP40227 531 aaKnown RBP16.88■□□□□ 0.29
CD9-210ENST00000543916 EPHB4P54760 987 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 FPGSQ05932 587 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 HAUS3Q68CZ6 603 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 TMEM199Q8N511 208 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 RETREG2Q8NC44 543 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 PIGOQ8TEQ8 1089 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 CHAMP1Q96JM3 812 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 CYP26B1Q9NR63 512 aa16.88■□□□□ 0.29
CD9-210ENST00000543916 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
CD9-210ENST00000543916 CAND2O75155 1236 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 CLCN3P51790 818 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
CD9-210ENST00000543916 TBC1D8BQ0IIM8 1120 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 GPNMBQ14956 572 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 XKR9Q5GH70 373 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 RPAINQ86UA6 219 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 LRRC71Q8N4P6 559 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 LINC01465Q8N7H1 131 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 ANKEF1Q9NU02 776 aa16.87■□□□□ 0.29
CD9-210ENST00000543916 SRPRBQ9Y5M8 271 aaKnown RBP16.87■□□□□ 0.29
CD9-210ENST00000543916 MAGEB2O15479 319 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 YEATS4O95619 227 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 MUTP22033 750 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 LONP1P36776 959 aaKnown RBP16.86■□□□□ 0.29
CD9-210ENST00000543916 MGAT3Q09327 533 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 MBTPS1Q14703 1052 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 STK38Q15208 465 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 FAM26DQ5JW98 314 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 EFCAB12Q6NXP0 572 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 OTUD6AQ7L8S5 288 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 METTL13Q8N6R0 699 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 AK8Q96MA6 479 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 CLIC6Q96NY7 704 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 OSBPL7Q9BZF2 842 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 CSRNP2Q9H175 543 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 PRO3102Q9H379 93 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 DDX19AQ9NUU7 478 aaKnown RBP16.86■□□□□ 0.29
CD9-210ENST00000543916 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
CD9-210ENST00000543916 STK24Q9Y6E0 443 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 CEP290O15078 2479 aa16.86■□□□□ 0.29
CD9-210ENST00000543916 IGKV6-21A0A0C4DH24 114 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 NBNO60934 754 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 MAFO75444 373 aaPredicted RBP16.85■□□□□ 0.29
CD9-210ENST00000543916 CHRNA1P02708 482 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 RARRES1P49788 294 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 MRPS6P82932 125 aaKnown RBP16.85■□□□□ 0.29
CD9-210ENST00000543916 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 PPIGQ13427 754 aaKnown RBP eCLIP16.85■□□□□ 0.29
CD9-210ENST00000543916 MKRN4PQ13434 485 aaPredicted RBP16.85■□□□□ 0.29
CD9-210ENST00000543916 DRP2Q13474 957 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 C16orf59Q7L2K0 433 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 RSPH3Q86UC2 560 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 CABP7Q86V35 215 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 NACC1Q96RE7 527 aa16.85■□□□□ 0.29
CD9-210ENST00000543916 DHX33Q9H6R0 707 aaKnown RBP16.85■□□□□ 0.29
CD9-210ENST00000543916 IL23AQ9NPF7 189 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms